Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi180g00009 ATGAACAACATAAAAAATATGGCAAAGTTTAGTCAAAGCAATGCTACTCATCATGATTTCCTTATTGGAAAGGTTATTTTTGTTGTTCTTTTATTATCACATATTTCATTTCAAGTTGCAACATGTGGCTCTACAGTAAAGTTTCTTCCTGGATTCAATGGTCCCCTTCCTTTTCTGCTCGAAACTGGGTATGTGGGAGTGGGAGAAAAAGAGGAAGTGCAAGTGTTTTATTATTTCATTGAATCAGAAAATAATCCCAAAGAAGATCCTCTCATGCTTTGGCTAACGGGTGGACCTGGTTGTTCTGCTTTGTCTGGTCTTGTCTTTGAAATAGGGCCAATTGGATTTAAAAGAGAGGAATACAATGGGAGCTTGCCAAATCTGATCTTGAGGGAACATTCATGGACAAAGGTGAGTAGCATTATATTTGTAGATTTGCCTGTTTCTACGGGCTTCACTTATGCCACAACAGATTCGGGTTCTCAACGACGTGACTCCATACAAATTGACCAAGCTCACCAATTTTTTAGAAAGTGGTTGATCGATCATCCAAAATTTCAATCAAATGAAGTTTACATCAGCGGCGACTCATATTCGGGTATTACTCTTCCTGTAATTGTTCAAGAAATTATACAAGCAAATGAAAAAGGGATCCCACCATGGATAAATCTTCAGGGATACGTGTTAGGGAATCCTGTAACAAATAAAAAGGAAATAAACTATAGAATCCCTTTTGCTCATGGAACTGGACTCATATCTGATGAACTATACGAGTCACTGCAAAAAAATTGTAATGGAGATTATACAAATTCAGAGACCAAAAGAGTTTTATGTTCCAAAGTACTCTGTTCTTTCGAAAAGAACCTTCCATATAAACTTTCCGCTTATTGGGCCAACGATGATAATGTTCGCAAAGCACTGCACATACGTAAGGGAAGTATTGGGAAATGGCAACGTTGTTCCTTTGATATACCTTATGAGGAAGATATCCCTAGTAGCTTTGATTATCATGTAAATCTAAGTAGAAAAGGATATCGTTCACTAATTTACAGTGGTGATCATGACATGAAGGTTCCATTATTGGATACCAAAGCATGGATAAAATCTTTAAATTATTCCATTGTTGATGATTGGAGATCTTGGTATACAAATGAACAAGTTTCAGGATACACAAGAACTTACTCGAATCAGATGACATTTGCAACTGTGAAGGGTGGAGGACACACTGCACCTGAGTTCCTTCCTGAAGAATGTTTCGCCATGTTTAGTAGGTGGATATCTAAGAGACCTTTGTAG 1296 0.3735 MNNIKNMAKFSQSNATHHDFLIGKVIFVVLLLSHISFQVATCGSTVKFLPGFNGPLPFLLETGYVGVGEKEEVQVFYYFIESENNPKEDPLMLWLTGGPGCSALSGLVFEIGPIGFKREEYNGSLPNLILREHSWTKVSSIIFVDLPVSTGFTYATTDSGSQRRDSIQIDQAHQFFRKWLIDHPKFQSNEVYISGDSYSGITLPVIVQEIIQANEKGIPPWINLQGYVLGNPVTNKKEINYRIPFAHGTGLISDELYESLQKNCNGDYTNSETKRVLCSKVLCSFEKNLPYKLSAYWANDDNVRKALHIRKGSIGKWQRCSFDIPYEEDIPSSFDYHVNLSRKGYRSLIYSGDHDMKVPLLDTKAWIKSLNYSIVDDWRSWYTNEQVSGYTRTYSNQMTFATVKGGGHTAPEFLPEECFAMFSRWISKRPL 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi180g00009 431 SUPERFAMILY alpha/beta-Hydrolases 46 430 IPR029058 -
Vivi180g00009 431 Gene3D alpha/beta hydrolase 56 430 IPR029058 -
Vivi180g00009 431 FunFam Serine carboxypeptidase-like 19 39 295 - -
Vivi180g00009 431 Pfam Serine carboxypeptidase 289 427 IPR001563 GO:0004185|GO:0006508
Vivi180g00009 431 Pfam Serine carboxypeptidase 50 280 IPR001563 GO:0004185|GO:0006508
Vivi180g00009 431 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 143 IPR001563 GO:0004185|GO:0006508
Vivi180g00009 431 PRINTS Carboxypeptidase C serine protease (S10) family signature 144 154 IPR001563 GO:0004185|GO:0006508
Vivi180g00009 431 PRINTS Carboxypeptidase C serine protease (S10) family signature 179 204 IPR001563 GO:0004185|GO:0006508
Vivi180g00009 431 PRINTS Carboxypeptidase C serine protease (S10) family signature 398 411 IPR001563 GO:0004185|GO:0006508
Vivi180g00009 431 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 45 413 IPR001563 GO:0004185|GO:0006508
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi180g00009 40 69 Calmodulin-binding Proteins AT2G22960 70.000 8.59e-08 50.4