Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi180g00008 ATGAACAACATAAAAAATATGGCAAAGTTTAGTCAAAGCAATGCTACTCATCATGATTTCCTTATTGGAAAGGTTATTTTTGTTGTTCTTTTATTATCACATATTTCATTTCAAGTTGCAACATGTGGCTCTACAGTAAAGTTTCTTCCTGGATTCAATGGTCCCCTTCCTTTTCTGCTCGAAACTGGGTATGTGGGAGTGGGAGAAAAAGAGGAAGTGCAAGTGTTTTATTATTTCATTGAATCAGAAAATAATCCCAAAGAAGATCCTCTCATGCTTTGGCTAACGGGTGGACCTGGTTGTTCTGCTTTGTCTGGTCTTGTCTTTGAAATAGGGCCAATTGGATTTAAAAGAGAGGAATACAATGGGAGCTTGCCAAATCTGATCTTGAGGGAACATTCATGGACAAAGGTGAGTAGCATTATATTTGTAGATTTGCCTGTTTCTACGGGCTTCACTTATGCCACAACAGATTCGGGTTCTCAACGACGTGACTCCATACAAATTGACCAAGCTCACCAATTTTTTAGAAAGTGGTTGATCGATCATCCAAAATTTCAATCAAATGAAGTTTACATCAGCGGCGACTCATATTCGGCAAATGAAAAAGGGATCCCACCATGGATAAATCTTCAGGGATACGTGTTAGGGAATCCTGTAACAAATAAAAAGGAAATAAACTATAGAATCCCTTTTGCTCATGGAACTGGACTCATATCTGATGAACTATACGAGTCACTGCAAAAAAATTGTAATGGAGATTATACAAATTCAGAGACCAAAAGAGTTTTATGTTCCAAAGTACTCTGTTCTTTCGAAAAGGCTATATCAGAAATTAGTATAGCCCATATTTTAGAACCGCTATGTACATGGCTAAATACTGAAAATTCTCCAAGGAGATCTCTAATTAATAAATATCACTCCAAAGTGTCGCCCTTAAAATGCCGAAACCTTCCATATAAACTTTCCGCTTATTGGGCCAACGATGATAATGTTCGCAAAGCACTGCACATACGTAAGGGAAGTATTGGGAAATGGCAACGTTGTTCCTTTGATATACCTTATGAGGAAGATATCCCTAGTAGCTTTGATTATCATGTAAATCTAAGTAGAAAAGGATATCGTTCACTAATTTACAGTGGTGATCATGACATGAAGGTTCCATTATTGGATACCAAAGCATGGATAAAATCTTTAAATTATTCCATTGTTGATGATTGGAGATCTTGGTATACAAATGAACAAGTTTCAGGATACACAAGAACTTACTCGAATCAGATGACATTTGCAACTGTGAAGGGTGGAGGACACACTGCACCTGAGTTCCTTCCTGAAGAATGTTTCGCCATGTTTAGTAGGTGGATATCTAAGAGACCTTTGTAG 1383 0.3738 MNNIKNMAKFSQSNATHHDFLIGKVIFVVLLLSHISFQVATCGSTVKFLPGFNGPLPFLLETGYVGVGEKEEVQVFYYFIESENNPKEDPLMLWLTGGPGCSALSGLVFEIGPIGFKREEYNGSLPNLILREHSWTKVSSIIFVDLPVSTGFTYATTDSGSQRRDSIQIDQAHQFFRKWLIDHPKFQSNEVYISGDSYSANEKGIPPWINLQGYVLGNPVTNKKEINYRIPFAHGTGLISDELYESLQKNCNGDYTNSETKRVLCSKVLCSFEKAISEISIAHILEPLCTWLNTENSPRRSLINKYHSKVSPLKCRNLPYKLSAYWANDDNVRKALHIRKGSIGKWQRCSFDIPYEEDIPSSFDYHVNLSRKGYRSLIYSGDHDMKVPLLDTKAWIKSLNYSIVDDWRSWYTNEQVSGYTRTYSNQMTFATVKGGGHTAPEFLPEECFAMFSRWISKRPL 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi180g00008 460 Gene3D alpha/beta hydrolase 42 299 IPR029058 -
Vivi180g00008 460 FunFam Serine carboxypeptidase-like 11 40 460 - -
Vivi180g00008 460 SUPERFAMILY alpha/beta-Hydrolases 46 459 IPR029058 -
Vivi180g00008 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 179 204 IPR001563 GO:0004185|GO:0006508
Vivi180g00008 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 144 154 IPR001563 GO:0004185|GO:0006508
Vivi180g00008 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 427 440 IPR001563 GO:0004185|GO:0006508
Vivi180g00008 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 143 IPR001563 GO:0004185|GO:0006508
Vivi180g00008 460 Pfam Serine carboxypeptidase 50 456 IPR001563 GO:0004185|GO:0006508
Vivi180g00008 460 Gene3D - 315 460 - -
Vivi180g00008 460 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 45 442 IPR001563 GO:0004185|GO:0006508
Vivi180g00008 460 FunFam Carboxypeptidase 314 459 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi180g00008 40 69 Calmodulin-binding Proteins AT2G22960 70.000 8.68e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi180g00008 K16296 - gmx:100792006 664.455