Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi180g00004 ATGGACAAAGGCTTTACATATGCCACAACAAATTCTGGTTCACAACGAAGTGACTCTATATTAGTTCATCAAACTCATCAATTTTTCAGAAAGTGGTTAGTTGATCATCCAAAATTCAAATCAAATGAAATTTACATTGGCGGTGATTCATACTCTGGCATCCCTATTCCAGGAATTGTTCAAGAAATTATACAAGAAAATGAAAAAGGTGTCCAACCTTGGATTAATCTTCAGGGATACTTGTTGGGAAATGCTGTAGCAACCAGAAAGGAAAGTAACTATAGAATTCCTTTTGCTCATGGAATGGGACTCATATCCGATGAACTATACGATTCACTCCAAATAAATTGTAAAGGCGATTATGTAAATGTAGAAAGCAGAAATATTTTATGTTCTAGAGATATTGAATTATTTGAAGAGGCTACATCAGGACTTAATTCAGCTCATATTTTAGACCCACAATGTGAGTGGCGTGATGATACTGAAAAAATTCTAAGGAGATCTCTAAGCAAGAAATATCCCTCCAACTTCCTCACTTCAAATCTCAGATTGCCTCCCTTAAATTGTCGAAGTTATCCATATTTCCTTTGCGCTGTTTGGGCCAATGATGAGAGTGTTCGCAATGCATTACACATACGTAAGGGTAGTATGGGAAAATGGCATCGTTGTACCTTTAATATACCTCATAAGAAGGATATATTAAACAGTTATGATTATCATGTAAATCTCAGTAGAAAAGGCATTCGTTCACTAATTTACAGTGGAGATCATGACTTGTTAGTTCCTTTCTTGGCGACACAAGCATGGATAAGATCTTTAAATTATTCCATCATTGATGATTGGAGACAGTGGTATACAAATGACCAAGTTGCAGGATACACACGGACTTACTCTAATATGATGACATTTGCAACTGTTAAGGGTGGAGGACACACAGCTCCAGAGTTTCAGCCTAAAGAATGCCTTGACATGTATAATAGATGGATATCTAATAAGGCTTTGTAG 1005 0.3622 MDKGFTYATTNSGSQRSDSILVHQTHQFFRKWLVDHPKFKSNEIYIGGDSYSGIPIPGIVQEIIQENEKGVQPWINLQGYLLGNAVATRKESNYRIPFAHGMGLISDELYDSLQINCKGDYVNVESRNILCSRDIELFEEATSGLNSAHILDPQCEWRDDTEKILRRSLSKKYPSNFLTSNLRLPPLNCRSYPYFLCAVWANDESVRNALHIRKGSMGKWHRCTFNIPHKKDILNSYDYHVNLSRKGIRSLIYSGDHDLLVPFLATQAWIRSLNYSIIDDWRQWYTNDQVAGYTRTYSNMMTFATVKGGGHTAPEFQPKECLDMYNRWISNKAL 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi180g00004 334 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 4 318 IPR001563 GO:0004185|GO:0006508
Vivi180g00004 334 FunFam Carboxypeptidase 188 333 - -
Vivi180g00004 334 SUPERFAMILY alpha/beta-Hydrolases 4 332 IPR029058 -
Vivi180g00004 334 Gene3D alpha/beta hydrolase 1 334 IPR029058 -
Vivi180g00004 334 PRINTS Carboxypeptidase C serine protease (S10) family signature 32 57 IPR001563 GO:0004185|GO:0006508
Vivi180g00004 334 PRINTS Carboxypeptidase C serine protease (S10) family signature 301 314 IPR001563 GO:0004185|GO:0006508
Vivi180g00004 334 Pfam Serine carboxypeptidase 3 331 IPR001563 GO:0004185|GO:0006508
Vivi180g00004 334 FunFam Carboxypeptidase 236 331 - -
Vivi180g00004 334 Coils Coil 331 334 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi180g00004 196 334 Calmodulin-binding Proteins AT2G22960 64.029 9.19e-60 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi180g00004 K16296 - gmx:100792006 551.592