Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1806g00001 ATGAAGATTACAAAAATGGACAATTTGTTAAGTCTTGTAATATGCACATTGCTGTTAGTTAAAGCAGCTGAAGGGGTTACTGTGCCAATCACTTATGTTCAAAGTGCAGTACCAAAAGGAGCTGTTTGTTTGGATGGAAGTCCACCAGCTTATCACTTTGATAAGGGATTTGAAGCTGGAATTGATAACTGGATTGTTCACTTTGAGGGAGGAGGATGGTGTAACAATGCCTCTACTTGCCTTGACCGTAGGGACACTCGATTAGGATCGTCGAAGAAAATGGATACAACACTTTCCTTTTCGGGTTTTTTTAGTAATGGAAAAAAGTTTAATCCAGATTTCTACAATTGGAACAGAATCAAGGTTAGGTATTGTGACGGTTCATCATTTACCGGTGATGTTGAAGCTGTTGATCCAGCTACCAATTTGCACTACAGAGGAGGAAGAATATTTGTTGCTGTCATTGAGGATTTACTAGCAAAGGGAATGAAAAACGCTAAAAATGCAATTCTATCTGGATGTTCAGCTGGAGGATTGACTTCTATTTTACAATGCGATCGCTTTAGAACTTTGCTGCCTGCAGCAGCGAAAGTTAAATGCGTCTCAGATGCTGGTTACTTTATCAATGCAAAGGCTGTCTCTGGAGCACAACACATTGAACAAATCTACAGCCAAGTTGTTCAAACACATGGCTCCGCCAAGAATTTGCCTTCATCTTGCACTTCAAGACTTCCACCAGGGCTGTGTTTTTTCCCACAAAACGTGGCCGCACAAATCAGTACACCGATCTTCTTTGTTAATGCAGCCTACGACTCGTGGCAGATTAAGAATATTTTGGCACCCGGTGTTGCTGATCCCCATGGCACTTGGCGTAGCTGCAAGCTCGATATAAAAGATTGCTCATCTAATCAATTAACCACAATGCAAGATTTCAGGACAGAATTCTTGAAGGCAATTAGTGTGGTTAGTAATTCTCCATCTAAAGGAATGTTTATCGACGGTTGTTATTCCCACTGCCAAACTGGAATGCAGGAAACATGGATGAGAAATGACTCTCCAGTGCTTGCCAATACAACAATAGCAAAGGCTGTGGGAGATTGGTATTTTGAGAGAAAGGGTTTTCATCAGATAGATTGTTCTTATCCTTGCAACCCTACTTGTCATAACCGTGTCTTTGAACAGAATTAA 1188 0.4091 MKITKMDNLLSLVICTLLLVKAAEGVTVPITYVQSAVPKGAVCLDGSPPAYHFDKGFEAGIDNWIVHFEGGGWCNNASTCLDRRDTRLGSSKKMDTTLSFSGFFSNGKKFNPDFYNWNRIKVRYCDGSSFTGDVEAVDPATNLHYRGGRIFVAVIEDLLAKGMKNAKNAILSGCSAGGLTSILQCDRFRTLLPAAAKVKCVSDAGYFINAKAVSGAQHIEQIYSQVVQTHGSAKNLPSSCTSRLPPGLCFFPQNVAAQISTPIFFVNAAYDSWQIKNILAPGVADPHGTWRSCKLDIKDCSSNQLTTMQDFRTEFLKAISVVSNSPSKGMFIDGCYSHCQTGMQETWMRNDSPVLANTTIAKAVGDWYFERKGFHQIDCSYPCNPTCHNRVFEQN 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1806g00001 395 PANTHER NOTUM-RELATED 15 389 IPR004963 GO:0016787
Vivi1806g00001 395 Pfam Pectinacetylesterase 23 372 IPR004963 GO:0016787
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1806g00001 5 392 Carbohydrate Esterase AT4G19420 57.920 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1806g00001 K19882 - gmx:100781246 660.603