Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi17g00142 ATGAACAACAATTGGCTTTCTTTCCCTCTCTCACCTTCTAATTCTTCCTTACCTGCAAATGATCTTCAAGCAACTCAATATCATCACTTTCCTCTTGGATTAGTCAATGAAAACATGGAAAACCCTTTTCAAAATCATGATTGGAATCTGATGAACACACATGGCAACAATGAAGTACCAAAGGTTGCGGATTTTCTCGGTGTATGCAAGTCTGAAAATCACTCAGATCTTGCTGCACATAATGAAATTCAGTCAAATGATTCAGATAACTATCTGTTCACAAATAGCAATAGTCTCATGCCAATGCAAAACCAAATGATAACAACTTGCACTAATGAGTATCAAGAAAAGGGTGGTAACAGTAACTTGCAATCTTTGACATTATCCATGGGAAGTGGTAAGGATTCAACATGTGAAACTAGTGCTAGTGGTGACAACAATAGTACAAACACAGTTGAAGTAGCGGTTCCTAAAAGAACTTCAGAAACCTTTGGTCAAAGAACTTCGATATATCGTGGTGTAACAAAACATAGATGGACCGGAAGGTATGAAGCTCATCTTTGGGATAACAGTTGTAGAAGGGAAGGACAATCAAGGAAAGGTCGTCAAGGTGGATATGACAAAGAAGAGAAAGCTGCTAGATCTTATGATTTAGCTGCACTTAAGTATTGGGGGACATCCACCACTACTAACTTTCCAGTTAGTAACTATGAGAAGGAAATAGATGAAATGAAGCACATGACAAGACAAGAATTTGTAGCCTCTATTAGAAGGAAAAGCAGTGGCTTCTCAAGGGGTGCTTCAATGTACCGTGGAGTTACAAGGCATCACCAACATGGAAGATGGCAAGCAAGGATCGGCAGAGTGGCCGGAAACAAAGATCTTTACTTGGGAACTTTCAGCACAGAAGAAGAGGCTGCAGAAGCATATGACATAGCAGCAATAAAATTCAGAGGACTCAACGCTGTAACTAACTTCGACATGACTCGTTACGACGTGAAAGCCATTCTCGAAAGCAACACGCTTCCGATCGGAGGAGGTGCTGCAAAAAGACTAAAAGAAGCGCAAGCTCTAGAAACTTCCAGAAAACGTGAAGAGCTGATTGCGCTCAACTCATCGTCTTTCCAGTATGGAGCATCAAGCTCGAGTAACGCAAGGCTTCAACCTTACCCTCTCGCGCATTATCAATATCCGTTTGAACAACCATCCCAACCTTTGTTAACCTTACAAAACAACCATGATAGCATCTCTCAATTCTCTCAACACCAAGGCGGCGGTGGTTATTTCCATACACAGCTTGAGTTGCACCAACAACAACAACAGAACCAACAAACGTCTCAGAATAATAATATCGGTTCGTTCTACAACGGTTATTTTCAGAGTCATCATCCTGGTTTGTTTCAGATGTATAACATGGGGTCTTCTTCTTCATCTTCTGTGATGGGAAATAACGTTGGTGGTGGGTCTAGTGGAATTTATAATGGAGGGTTGAATGGTAATAATGCTGTGGGAACTGTTGTGGAGGAATTTGTTCCGGTTAAGGTTGATTATGATATGCCGGATGGAGGCGGCGGCTTTGGCGGCTGGTCGGCAGCGGGAGAGAACATGCAGGCGTCAGCTACGGCTGATTTATTTACAATGTGGAATGACTATGAAACAAGAGAGAATTAG 1671 0.4183 MNNNWLSFPLSPSNSSLPANDLQATQYHHFPLGLVNENMENPFQNHDWNLMNTHGNNEVPKVADFLGVCKSENHSDLAAHNEIQSNDSDNYLFTNSNSLMPMQNQMITTCTNEYQEKGGNSNLQSLTLSMGSGKDSTCETSASGDNNSTNTVEVAVPKRTSETFGQRTSIYRGVTKHRWTGRYEAHLWDNSCRREGQSRKGRQGGYDKEEKAARSYDLAALKYWGTSTTTNFPVSNYEKEIDEMKHMTRQEFVASIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFDMTRYDVKAILESNTLPIGGGAAKRLKEAQALETSRKREELIALNSSSFQYGASSSSNARLQPYPLAHYQYPFEQPSQPLLTLQNNHDSISQFSQHQGGGGYFHTQLELHQQQQQNQQTSQNNNIGSFYNGYFQSHHPGLFQMYNMGSSSSSSVMGNNVGGGSSGIYNGGLNGNNAVGTVVEEFVPVKVDYDMPDGGGGFGGWSAAGENMQASATADLFTMWNDYETREN 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi17g00142 556 FunFam AP2-like ethylene-responsive transcription factor ANT 169 235 - -
Vivi17g00142 556 FunFam AP2-like ethylene-responsive transcription factor 268 329 - -
Vivi17g00142 556 Pfam AP2 domain 270 319 IPR001471 GO:0003700|GO:0006355
Vivi17g00142 556 Pfam AP2 domain 170 225 IPR001471 GO:0003700|GO:0006355
Vivi17g00142 556 CDD AP2 169 235 IPR001471 GO:0003700|GO:0006355
Vivi17g00142 556 SUPERFAMILY DNA-binding domain 268 328 IPR016177 GO:0003677
Vivi17g00142 556 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 61 437 - -
Vivi17g00142 556 ProSiteProfiles AP2/ERF domain profile. 170 233 IPR001471 GO:0003700|GO:0006355
Vivi17g00142 556 MobiDBLite consensus disorder prediction 130 150 - -
Vivi17g00142 556 Gene3D AP2/ERF domain 170 235 IPR036955 GO:0003700|GO:0006355
Vivi17g00142 556 Gene3D AP2/ERF domain 269 329 IPR036955 GO:0003700|GO:0006355
Vivi17g00142 556 ProSiteProfiles AP2/ERF domain profile. 269 327 IPR001471 GO:0003700|GO:0006355
Vivi17g00142 556 SMART rav1_2 269 333 IPR001471 GO:0003700|GO:0006355
Vivi17g00142 556 SMART rav1_2 170 239 IPR001471 GO:0003700|GO:0006355
Vivi17g00142 556 CDD AP2 268 327 IPR001471 GO:0003700|GO:0006355
Vivi17g00142 556 SUPERFAMILY DNA-binding domain 169 235 IPR016177 GO:0003677
Vivi17g00142 556 PRINTS Ethylene responsive element binding protein signature 171 182 IPR001471 GO:0003700|GO:0006355
Vivi17g00142 556 PRINTS Ethylene responsive element binding protein signature 309 329 IPR001471 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi17g00142 3 550 AP2-EREBP Transcription Factor Family AT1G51190 61.644 0.0 623
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Vivi17g00142 AP2 4.2e-08 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi17g00142 K09285 - gmx:100170752 724.931