Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi17g00129 ATGGACCGCAAGCAAAATTTGAAGAGGAAAGTTACCGAAGAAGATGTTCTTCGTGAAAACTCTCGCCGTCTATATCTTATCGAGGATATTGTTCAACACATCGATATGTTAAACTCAGTCTCTTCGTCGTATGATCCGGATATTGGTCATGCTCAAGATGTTCTATGTTTTCTTTCCGACCTCGCCAATGATGAGGATACTGTGAATCTTTTGGTAATTTGTGATGTCATTCCATCTCTGGTGAAGGTTTTGCATATGGTGTCTAATGGGGGTGAATTCGATGTTGATACTTACGATATTAATAGAGACTGTGTCTTTATCCTCGGTCTTATTGTTGTCAAGCCTGAGTATCAACAACTTATTGTTGATGCTGGAGCCTTGCCCTGTCTTGTAGACTTGTTGATGAGACCTAAGGCCCCTGATATTTCTCAAATACATTTTTCTCATCTTCTTGGGAGAGTAGCCGATGTAATAACCGATCTTGCTCATGATAATAACAGCATCAAGACCCTTGTCAGGTTGGAAGGTGGCATCCCTCCTCTTGTTGATTTGCTTGAATCCGATGATACAGAGGTACATAGAGCTGCTACAGAGGCTTTAAGAACTCTTGCATTTCAAAATGCTGAGAATAAAGACCAGGTGCTGGAGCAAATGTTATATCTTATGCGCTTCGGGGAAAAGGCTGTTCAGAAACGTGTAGCTCTTGCTCTTGCACATCTATGTTCCGCCGATGACCGTAAAGCTATTTTCATAGACAATAATGGATTAGAATTGTTGTTGAATCTTCTTGGATCTACAACCAAAAAGGAGAAGCGTGAAGCCGCTGAAGCGCTTCACACAATGGCTACCAAAGGAATGAGTGTCTCTATTGTTGATCTTGCGCCTGCATCCCCAACTCCCCTGGTTTACATGGGTGAGCAATATGTAAACAATCCAGTACTTTCTGATGTCACATTCATAGTTGAAGGCAAACGCTTTCATGCTCATAGAGCTTGTTTACTTTCATCTGATATATTTCGCGCAATGTTTGATGGTGGTTACAAGGAAAAGGAATCCAAGGAAATAGAGATTCCCAACATCAAATGGAATGTCTTTGAGTTGATGATGAGATTTATATACACCGGAACAGTAGCTGTTGATTTAGATATTGCCCTGGACCTCCTTAAAGCTGCAGATCAATATCTTCTCGACGGCCTTAAGCGTATTTGTGAATCTGTTATTTATGAGGACATTTCTGTGGAAAATGTTTCAGTAATGTATGTGATGTCAGACACCTATAATGCTACATCGTTAAAATATTCATGCATACTCTTTATCTTGAAGCATTTTGATAATGTGAGCGCCAAACCGTGGTATTCTCGCTTTATCCGTTGCATTAAGCCGGACATTCGGAACTTCTTCTCGACTTTACTTACCATGCCTAAACACGCTAGCTAG 1437 0.4071 MDRKQNLKRKVTEEDVLRENSRRLYLIEDIVQHIDMLNSVSSSYDPDIGHAQDVLCFLSDLANDEDTVNLLVICDVIPSLVKVLHMVSNGGEFDVDTYDINRDCVFILGLIVVKPEYQQLIVDAGALPCLVDLLMRPKAPDISQIHFSHLLGRVADVITDLAHDNNSIKTLVRLEGGIPPLVDLLESDDTEVHRAATEALRTLAFQNAENKDQVLEQMLYLMRFGEKAVQKRVALALAHLCSADDRKAIFIDNNGLELLLNLLGSTTKKEKREAAEALHTMATKGMSVSIVDLAPASPTPLVYMGEQYVNNPVLSDVTFIVEGKRFHAHRACLLSSDIFRAMFDGGYKEKESKEIEIPNIKWNVFELMMRFIYTGTVAVDLDIALDLLKAADQYLLDGLKRICESVIYEDISVENVSVMYVMSDTYNATSLKYSCILFILKHFDNVSAKPWYSRFIRCIKPDIRNFFSTLLTMPKHAS 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi17g00129 478 Pfam Armadillo/beta-catenin-like repeat 175 204 IPR000225 GO:0005515
Vivi17g00129 478 SUPERFAMILY POZ domain 303 409 IPR011333 -
Vivi17g00129 478 SUPERFAMILY ARM repeat 44 283 IPR016024 -
Vivi17g00129 478 Gene3D - 12 144 IPR011989 -
Vivi17g00129 478 SMART arm_5 165 205 IPR000225 GO:0005515
Vivi17g00129 478 SMART arm_5 243 283 IPR000225 GO:0005515
Vivi17g00129 478 SMART arm_5 114 163 IPR000225 GO:0005515
Vivi17g00129 478 SMART arm_5 64 113 IPR000225 GO:0005515
Vivi17g00129 478 Pfam BTB/POZ domain 308 408 IPR000210 GO:0005515
Vivi17g00129 478 Gene3D Potassium Channel Kv1.1; Chain A 311 449 IPR011333 -
Vivi17g00129 478 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 213 475 IPR044282 -
Vivi17g00129 478 SMART BTB_4 315 411 IPR000210 GO:0005515
Vivi17g00129 478 Gene3D - 145 216 IPR011989 -
Vivi17g00129 478 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 176 211 IPR000225 GO:0005515
Vivi17g00129 478 ProSiteProfiles BTB domain profile. 315 381 IPR000210 GO:0005515
Vivi17g00129 478 Gene3D - 217 310 IPR011989 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Vivi17g00129 BTB 2.3e-24 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi17g00129 - - vvo:131614774 913.679