Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi17g00126 ATGGAGATGAATGATAGTGATGTTGATTTAGCCTCACCGTTAAAAGACGTCAATGATCAAGAACACACATTGGAGGAATGGATTCCTGTATGTGCTGATGAACTCAAACCTGTGATTGGCAAGGTATTTGATACTTTAGTAGAAGGGGGAGTATTTTATAAAAATTATGCACATGCAGTTGGTTTTAGTGTACGTAGTTCGACTGAAACAAAAGATAAAATTGGTGTCAAGTGGAAATATTTTCTTTGCTCAAAAGAAGGTTTTAAAGTAGAAAAAAAGAAAGTGATTCCTGAGTTGCTTATGGCTGAAAATAGTTTGGCTAAAAGCAGAAAAAGAAAACTGACACGAGAGGGATGTAAAGCAAAAATTATTTTCAAGAGAACTATTGAGGGTAAATATGAAGTCTCAAAATTTCATGAAGGTCATTCACATGGACTAGTCACGCCTAGAAAGAAACAATTCTTAAGATCAGCAAGGAGTGTGAATAGTGTTCATAAAAGTTTATTGTTTTCCTGCAATAGAGCTAATGTGGGGACTTCAAAAGTTTATCAAATAATGAAGGAGCAGGTTGGGAGTTATGAAAATATAGGATGTACACAAAGGGATTTTCAGAATTATTCAAGAAATTTAAAAGAATTGATCAAAGACTCTGATGCAGATATGTTTATTGATAATTTTAGAAGAAAACGTGAGATGAACCACTCATTTTTCTATGATTATGAGGCTGATAATGAAGGGAAGCTAAAATACGTGTTTTGGGCTGATGGAATTTGTCGAAAAAATTACTCTTTGTTTGGAGATGTAATTTCATTCGACACAACATATAGTACAAACAAGTATTCCATGATTTTCGCTCCATTTACTGGCGTAAATCATCATCGTCAAAGTATAACCTTTGGGGCTGCATTGTTAGCTGATGAAAAATATGAATCATTTGTGTGGTTGTTTGAGGCATTTTTGAAAGCAATGGGAGGACATAAACCTGTTGTGATAATAACAGATCAAGACCAAGCTATGACGAATGCAGTGGAAGAGGTTTTTAACGGGTCTTCTCATAGATTTTGTATGTGGCACATTCTAAAAAAACTTTCAGAAAAAGTGGGTGGTTCCTTAAATTCGAATGCGGATTTTAATAATCGTCTCAAGTCATGTGTTTGGAATTCAGAGTCCTCGGAAGAATTTGAATTAAAATGGAATAATGTTATTAGTGATTTCAAGTTGGAAGAGAATGGTTGGCTTTCTAAAATGTATGATCTTAGAAGCATGTGGATACCAGCTTATTTTAAAGATATGTTTATGGCTGGAATTTTGAGAACAACTTCAAGATCAGAGAGTGAAAATTCATTCTTTGGTAACTACTTGAACAAGAATCTTACTTTAGTGGAATTTTGGATGCGATTTGATTCTGCATTAGAAGCACAGAGGCATAAAGAACTACTTGCAGATAATGATACACTTCATTCTAATCCAGAGTTAAAGATGAGCATGGATTTGGAGAAGCACGGTAGAGAGGTTTATACTCATGAAAATTTTTACATATTTCAGAGGGAGTTATGGAGTGCATGTGTGGATTGTGGAGTTGAAGGAATGCACAATGAAGGTGAGAATTTAATATTTTCTATACTTGATAATGTTGTGGTTAATGACACCAAAGTGAGCAAAAATAGGAAAGTTGTGTATGATTTGTCTAACCACATTGCTTGTTGTTCATGTAAAATGTTTGACTCTGAAGGGATACCATGCCGACATATTCTTTTTGTACTAAAGGGGAGAGGTTTTAGTAATATTCCAAGTCATTACATCGTTGATAGATGGACGAAACTAGCAACAAGTAAGCCCGTTTTTGATTGTGATGGAAATGTATTAGAGGCATGCTCTAAATTTGAAAGTGATAGGACATTAGTTTCAAAAGCATGGGCACAATTGTTTAAATGCATGCATATGGCTGGTTCAAATAAAGAGAAATTGCTCCTAATTTTCAATGAGGGTTGTAGTATTGAATTGAAAATGGCTAATATGAAGAGTGACATCATACCAAAACCATTGGATGAGTTGGAGGCTTTTACTGGTTGCAATGTATCTAAGGAAATTGAAGTTCTTCCACCCCAACCTTCACATACTAAAGGTTGTGGAAAAAGAATTAAAGGGGGAAAAGAGAAGGCTATAGAAGAACAACAAAAGAGAACAAGACTTTGTAAAACTTGTAAGAGATATGCAGCCCATGATAGTCGTAATTGTCCCACAAAATTTTCATCTTAA 2259 0.3466 MEMNDSDVDLASPLKDVNDQEHTLEEWIPVCADELKPVIGKVFDTLVEGGVFYKNYAHAVGFSVRSSTETKDKIGVKWKYFLCSKEGFKVEKKKVIPELLMAENSLAKSRKRKLTREGCKAKIIFKRTIEGKYEVSKFHEGHSHGLVTPRKKQFLRSARSVNSVHKSLLFSCNRANVGTSKVYQIMKEQVGSYENIGCTQRDFQNYSRNLKELIKDSDADMFIDNFRRKREMNHSFFYDYEADNEGKLKYVFWADGICRKNYSLFGDVISFDTTYSTNKYSMIFAPFTGVNHHRQSITFGAALLADEKYESFVWLFEAFLKAMGGHKPVVIITDQDQAMTNAVEEVFNGSSHRFCMWHILKKLSEKVGGSLNSNADFNNRLKSCVWNSESSEEFELKWNNVISDFKLEENGWLSKMYDLRSMWIPAYFKDMFMAGILRTTSRSESENSFFGNYLNKNLTLVEFWMRFDSALEAQRHKELLADNDTLHSNPELKMSMDLEKHGREVYTHENFYIFQRELWSACVDCGVEGMHNEGENLIFSILDNVVVNDTKVSKNRKVVYDLSNHIACCSCKMFDSEGIPCRHILFVLKGRGFSNIPSHYIVDRWTKLATSKPVFDCDGNVLEACSKFESDRTLVSKAWAQLFKCMHMAGSNKEKLLLIFNEGCSIELKMANMKSDIIPKPLDELEAFTGCNVSKEIEVLPPQPSHTKGCGKRIKGGKEKAIEEQQKRTRLCKTCKRYAAHDSRNCPTKFSS 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi17g00126 752 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 34 633 IPR031052 GO:0006355
Vivi17g00126 752 ProSiteProfiles Zinc finger SWIM-type profile. 556 592 IPR007527 GO:0008270
Vivi17g00126 752 Pfam FAR1 DNA-binding domain 52 147 IPR004330 -
Vivi17g00126 752 Pfam MULE transposase domain 268 362 IPR018289 -
Vivi17g00126 752 Pfam SWIM zinc finger 567 588 IPR007527 GO:0008270
Vivi17g00126 752 SMART 26again6 567 594 IPR006564 GO:0008270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi17g00126 FAR1 4.1e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi17g00126 - - mtr:112420857 909.827