Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi17g00099 ATGGCAAGCTTCTCCGCGCAGCGGCTTGTTTACGCAGTCCGCTCCTCCTCCGCCACAACGGCGGGGTCTCTCATCGGTGGCAGTTTCCACCGCCGTCAATTTTCAGCGGGGAACGTGGCTCGCGCGACGGCGGCAATAATTGATAAGGAGCCTTGGTGGAAGGAGTCGATGGAAAAGGTTCGCAACATTGGGATCTCAGCGCACATCGATTCCGGGAAGACGACGTTGACGGAGCGGGTACTGTTCTACACCGGTCAGATCCACAAAATGCACGAAGTTCGCGGGAAGGATGGCTGTGGTGCGGTTATGGACAGTATGGTTTTGGAGAGAATGAAGGGAATCACCATTAAGTCTGCTTCTACTTATTGCAATTGGAAAGGCTCTAAGATCAACATAATTGACACACCTGGTCACGTTGATTTCACCATTGAAGTCGAGAGGGCTTTGCGTGTTATGGACGGCGCAATTCTTCTTCTTTGTAGTGTTGGTGGTGTGCAAAGTCAGTCCATTACTGTTGATCGCCAAATGAGAAGATACGAAGTTCCAAGAATTGCATTTATCAACAAGCTTGATCGAATGGGAGCCGATCCGTGGAAAGTTTTAAACCAGGCTAGATCTAAGCTTCGCCATCATACTGCTGCAATTCAGGTTCCAATAGGTTTGGAGAGTGAATTCACTGGACTTATTGATCTTGTCAAGTTAAAGGCCTATTATTTTCAAGGTTCGCATGGGGAGGACGTTGTCGTTAAAGAAGTACCTTCAAACATGGAAGCTTTGGTAGCAGATAAAAGACGCGAACTTATAGAAAAAGTGTCAGAGGTTGATGATATACTTGCCGAAGCTTTTCTCAGTGACGAGACTATTTCAGATGATGATCTTGAGGGAGCAATTCGCAGGGCTACCATAGCTCGGAAATTTATACCGGCATTCATGGGCAGTGCTTTCAAAAACAAGGGGGTACAACCACTTTTGGATGGCGTACTTAGTTATTTGCCATGTCCAATTGAAGTTAGCAGTTATGCTCTAGACCAATCTAAGAATGAAGAGAAGATTGAGCTTACCGGAAGTCCGGATGCACCCCTTGTAGCATTGGCTTTCAAGTTGGAGCAAACAAAGTCAGGACAGTTAACGTATCTCAGAATTTATGACGGCATCATTCGAAAGGGGGGTTTCATTTTTAATGTCAACACAGGTAAGAATATTAAGATTTCTCGTCTGTTTCAAATGCATTCTGATGAAATGCATGACATTCAAGAGGCCCATGCTGGTCAAATAGTTGCAGTATTTGGGCCGGAGTGTGCATCAGGAGATACTTTTACTGATGGGTCAGTAAAGTACACAATGACTTCTATGGCTATTCCTGAACCTGTCATGTCATTAGCGGTACGACCTGTCTTGCAAGATTCTGGAGGGAAATTTTCAAAAGCTTTGAACCGTTTCCAAAGAGAGGATCCTACTTTCCGTGTTGGCTTGGACCCTGAGAGTGGGGAGACAATCATTTCTGGTATGGGAGAAATGCATTTACAGATTTACATTGAACGCATTATGATGGAGTACAACATTGCCACTTCGGTTGGAAAGCCCCGTGTGAACTTCAGAGAAACTATTACTCAACGCGCCACTTTTGATTATTTACATAAGAAGCAATCCGGTGGACAAGGACAATATGCAAGGGTGATTGGGTATATTGAACCGCTTCCTGAAGCTAAGTTTGAATTTGAAAACATGCTTGTTGGTCAAGCTATTCCGTCAAATTTTATGCCTGCAATTGAAAAAGGCTTTAAAGAAGCTGCCAACTCTGGCGCCTTAATCGGACATCCAGTTGAAAATCTCCGAGTTGTCTTGACAGATGGCGCTGCTCATGCTGTTGACTCGAGTGAACTTGCCTTTAAATTGGCTTCTATCTGTGCTTTTAGACAGTGTTACGGAGCTTCTAAACCAGTTATTTTAGAACCTATCATGCTTGTTGAGTTGAAAGTACCCACAGAATTTCAAGGAGCTGTCGCTGGTGAACTGAACAAGAGAAAAGGTGTGATTGTTGGCAATGATCAAGATGGAGATGATTCTATCATTACAGCTCATGTCCCTCTTAACAATATCTTTGGGTATTCTACAGTTCTTCGTTCAATGACACAGGGAAAGGGTGAATTCACAATGGAATATAAGGAGCATTCACCTGTTTCTCATGATGTACAAACCCAATTGATAAACACATACAAGGGCAATAAGGCAGCCGAATGA 2241 0.4404 MASFSAQRLVYAVRSSSATTAGSLIGGSFHRRQFSAGNVARATAAIIDKEPWWKESMEKVRNIGISAHIDSGKTTLTERVLFYTGQIHKMHEVRGKDGCGAVMDSMVLERMKGITIKSASTYCNWKGSKINIIDTPGHVDFTIEVERALRVMDGAILLLCSVGGVQSQSITVDRQMRRYEVPRIAFINKLDRMGADPWKVLNQARSKLRHHTAAIQVPIGLESEFTGLIDLVKLKAYYFQGSHGEDVVVKEVPSNMEALVADKRRELIEKVSEVDDILAEAFLSDETISDDDLEGAIRRATIARKFIPAFMGSAFKNKGVQPLLDGVLSYLPCPIEVSSYALDQSKNEEKIELTGSPDAPLVALAFKLEQTKSGQLTYLRIYDGIIRKGGFIFNVNTGKNIKISRLFQMHSDEMHDIQEAHAGQIVAVFGPECASGDTFTDGSVKYTMTSMAIPEPVMSLAVRPVLQDSGGKFSKALNRFQREDPTFRVGLDPESGETIISGMGEMHLQIYIERIMMEYNIATSVGKPRVNFRETITQRATFDYLHKKQSGGQGQYARVIGYIEPLPEAKFEFENMLVGQAIPSNFMPAIEKGFKEAANSGALIGHPVENLRVVLTDGAAHAVDSSELAFKLASICAFRQCYGASKPVILEPIMLVELKVPTEFQGAVAGELNKRKGVIVGNDQDGDDSIITAHVPLNNIFGYSTVLRSMTQGKGEFTMEYKEHSPVSHDVQTQLINTYKGNKAAE 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi17g00099 746 Pfam Elongation Factor G, domain III 453 527 IPR041095 -
Vivi17g00099 746 SUPERFAMILY EF-G C-terminal domain-like 651 739 IPR035647 -
Vivi17g00099 746 CDD EF-G 62 334 - -
Vivi17g00099 746 FunFam Elongation factor G, mitochondrial 343 456 - -
Vivi17g00099 746 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 332 IPR027417 -
Vivi17g00099 746 PRINTS GTP-binding elongation factor signature 62 75 IPR000795 GO:0003924|GO:0005525
Vivi17g00099 746 PRINTS GTP-binding elongation factor signature 111 119 IPR000795 GO:0003924|GO:0005525
Vivi17g00099 746 PRINTS GTP-binding elongation factor signature 183 192 IPR000795 GO:0003924|GO:0005525
Vivi17g00099 746 PRINTS GTP-binding elongation factor signature 147 158 IPR000795 GO:0003924|GO:0005525
Vivi17g00099 746 PRINTS GTP-binding elongation factor signature 131 141 IPR000795 GO:0003924|GO:0005525
Vivi17g00099 746 Pfam Elongation factor G, domain IV 528 643 IPR005517 GO:0005525
Vivi17g00099 746 PANTHER ELONGATION FACTOR G, MITOCHONDRIAL 35 738 - -
Vivi17g00099 746 SUPERFAMILY Ribosomal protein S5 domain 2-like 532 647 IPR020568 -
Vivi17g00099 746 FunFam Elongation factor G 53 343 - -
Vivi17g00099 746 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 58 335 IPR000795 GO:0003924|GO:0005525
Vivi17g00099 746 NCBIfam elongation factor G 56 740 IPR004540 GO:0003746|GO:0005525|GO:0006414
Vivi17g00099 746 Gene3D - 652 722 - -
Vivi17g00099 746 FunFam Elongation factor G 534 666 - -
Vivi17g00099 746 SMART EFG_IV_2 529 646 IPR005517 GO:0005525
Vivi17g00099 746 FunFam Elongation factor G 652 722 - -
Vivi17g00099 746 FunFam Elongation factor G 457 533 - -
Vivi17g00099 746 Gene3D Translation factors 342 459 - -
Vivi17g00099 746 Gene3D - 52 337 IPR027417 -
Vivi17g00099 746 CDD EFG_III 454 529 IPR009022 -
Vivi17g00099 746 Gene3D Elongation Factor G (Translational Gtpase), domain 3 460 533 - -
Vivi17g00099 746 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 104 119 IPR031157 -
Vivi17g00099 746 SMART EFG_C_a 648 735 IPR000640 -
Vivi17g00099 746 Gene3D - 534 736 IPR014721 -
Vivi17g00099 746 NCBIfam small GTP-binding protein domain 59 233 IPR005225 GO:0005525
Vivi17g00099 746 SUPERFAMILY Translation proteins 299 451 IPR009000 -
Vivi17g00099 746 CDD mtEFG1_C 651 728 IPR035649 -
Vivi17g00099 746 Pfam Elongation factor Tu GTP binding domain 59 332 IPR000795 GO:0003924|GO:0005525
Vivi17g00099 746 CDD EFG_mtEFG1_IV 532 642 IPR005517 GO:0005525
Vivi17g00099 746 Pfam Elongation factor Tu domain 2 374 440 IPR004161 GO:0005525
Vivi17g00099 746 SUPERFAMILY EF-G C-terminal domain-like 453 530 IPR035647 -
Vivi17g00099 746 CDD mtEFG1_II_like 361 441 - -
Vivi17g00099 746 Hamap Elongation factor G [fusA]. 56 739 IPR004540 GO:0003746|GO:0005525|GO:0006414
Vivi17g00099 746 Pfam Elongation factor G C-terminus 649 734 IPR000640 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi17g00099 376 536 Eukaryotic Initiation Factors Gene Family AT3G22980 23.596 2.70e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi17g00099 K02355 - gmx:100783315 1237.63