Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi17g00095 ATGGGTAATGGTGACTATGCTTCTTACTCTTCTGGTATGAACATTGAGAGTGTTCACCGTGTGGCTATTCCGCCGCCGCAACCGTTTTTTGAGTCTCTGAAATATTCTGTGAAGGAGACTTTATTCCCGGATGATCCATTGAGGAAGTTCAAGAATCAACCAGCTTCGAAGAAGTTTGTGCTTGCTCTTCAACACTTTCTGCCCATTTTGGAGTGGGGTCCAAAATATACTCTTGGGTTCTTTAAATCTGATCTTATTGCTGGGATCACCATTGCTAGTTTGGCTATTCCTCAAGGGATCAGTTATGCTAAGCTTGCCAATCTTCCTCCAATTCTTGGACTTTATTCAAGCTTTATACCGCCGTTGATATATGCCATGATGGGTAGCTCGAGGGATTTGGCGGTGGGAACTGTGGCGGTTGGATCGCTTCTGATGGCGTCGATGTTGAGTCGTGAAGCTAGTCCAACAGAGAATCCGACGCTTTATCTCCACCTTGCTTTCACTGCTACATTCTTTGCTGGACTTCTACAATTATCACTTGGCCTCTTCAGGTTAGGGTTTATTGTGGATTTTCTATCACATGCAGCGATAGTAGGGTTCATGGGAGGAGCAGCTACAGTAGTTTGTCTACAACAGCTAAAATCGATTTTAGGACTTGAAAAATTCACACATAAAGCTGATATTGTGTCAGTTATGAACTCTGTTTTCAGCCAAACTCACGAGTGGAGGTGGGAAAGTGCAGTGTTAGGATGTTGTTTCATTTTCTTCCTCCTTGTTACAAGATACTTCAGCAAACGACAACCAAGGTTCTTTTGGGTGTCAGCCATGGCACCACTGACGTCGGTGATATTGGGAAGTATATTGGTTTATCTAACTCACGCTGAGAAGCACGGCGTTGAAGTGATAGGAAACTTGAAGAAAGGGCTAAATCCACCTTCAGCATCAGATTTAGTGTTTGTGTCACCTTATTTGGGCACAGCCATCAAAACTGGACTCATTACTGGCATAATAGCTCTTGCGGAAGGAATAGCAGTAGGAAGAAGCTTTGCAATGTTCAAGAATTACCATATTGATGGCAATAAAGAAATGATAGCTATTGGTACCATGAATATTTTTGGTTCACTAACCTCTTGCTACCTCACAACAGGCCCGTTTTCGCGTTCCGCTGTGAATTACAATGCTGGTTGCAAAACTGCAGCATCAAACATTGTAATGTCAATAGCAGTGATGTTAACATTATTATTCCTAACTCCTTTGTTCCATTACACTCCTCTAGTGGTACTATCCGCCATAATCGTATCTGCAATGCTTGGACTCATAGATTATCAAGCCGCAATCCATTTGTGGAAAATCGATAAATTTGATTTTCTAGTATGTTTCAGTGCATATGTTGGAGTTGTCTTTGGCAGTGTCGAAATTGGCTTAGTACTAGCAGTTGCAATATCTGTACTTAGAGTACTTTTATTTGTAGCAAGGCCAAGAACATTTGTGTTAGGAAACATTCCTAATTCATCAGCATACAGAAATGTAGAACATTATCCAAATGTGCATCATGTTCCTGGAATACTAATTCTTGAAATTGATGCGCCGATTTACTTTGCAAATGCAAGCTATTTAAGAGAGCGGATTACAAGGTGGATTGATGAAGAGGAAGAGAAAATCAAAGGTGCAGGAACTACTAGTTTGCAGTATGTTATAGTGGATATGACAGCTGTTGCGAACATTGATACAAGTGGAATAAGCATGCTTGAAGAGTTCAAGAAGACGGTCGATAGAAAAGGACTACAACTTGTTCTGGTCAATCCCGGAAGCGAGGTGACGAAGAAGCTGAACAAATCAAAGTTCCTAGATGAAATAGGACATAAATGGGTTTATGTGACAGTTGAAGAGGCTGTTGGAGTATGCAGCAGCTTCATGCTTCATACACAAAAGGCTAACCCTAAAGATGAATCAGAAGGTTTGAATAGTGTGTGA 1974 0.4124 MGNGDYASYSSGMNIESVHRVAIPPPQPFFESLKYSVKETLFPDDPLRKFKNQPASKKFVLALQHFLPILEWGPKYTLGFFKSDLIAGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSRDLAVGTVAVGSLLMASMLSREASPTENPTLYLHLAFTATFFAGLLQLSLGLFRLGFIVDFLSHAAIVGFMGGAATVVCLQQLKSILGLEKFTHKADIVSVMNSVFSQTHEWRWESAVLGCCFIFFLLVTRYFSKRQPRFFWVSAMAPLTSVILGSILVYLTHAEKHGVEVIGNLKKGLNPPSASDLVFVSPYLGTAIKTGLITGIIALAEGIAVGRSFAMFKNYHIDGNKEMIAIGTMNIFGSLTSCYLTTGPFSRSAVNYNAGCKTAASNIVMSIAVMLTLLFLTPLFHYTPLVVLSAIIVSAMLGLIDYQAAIHLWKIDKFDFLVCFSAYVGVVFGSVEIGLVLAVAISVLRVLLFVARPRTFVLGNIPNSSAYRNVEHYPNVHHVPGILILEIDAPIYFANASYLRERITRWIDEEEEKIKGAGTTSLQYVIVDMTAVANIDTSGISMLEEFKKTVDRKGLQLVLVNPGSEVTKKLNKSKFLDEIGHKWVYVTVEEAVGVCSSFMLHTQKANPKDESEGLNSV 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi17g00095 657 SUPERFAMILY SpoIIaa-like 513 635 IPR036513 -
Vivi17g00095 657 ProSiteProfiles STAS domain profile. 512 635 IPR002645 -
Vivi17g00095 657 CDD STAS_SulP_like_sulfate_transporter 513 628 - -
Vivi17g00095 657 ProSitePatterns SLC26A transporters signature. 110 131 IPR018045 GO:0008271|GO:0008272
Vivi17g00095 657 Pfam STAS domain 513 631 IPR002645 -
Vivi17g00095 657 Gene3D STAS domain 492 637 IPR036513 -
Vivi17g00095 657 Pfam Sulfate permease family 81 461 IPR011547 GO:0016020
Vivi17g00095 657 PANTHER SULFATE TRANSPORTER 30 639 IPR001902 GO:0016020|GO:0055085
Vivi17g00095 657 NCBIfam sulfate permease 68 631 IPR001902 GO:0016020|GO:0055085
Vivi17g00095 657 FunFam Sulfate transporter 31 492 638 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi17g00095 19 646 Inorganic Solute Cotransporters AT4G02700 67.727 0.0 884
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi17g00095 K17471 - gmx:100791091 1142.49