Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi17g00074 ATGGATGTAAAGAGAAATACTATTGGGCCAGCTTGTATGGCCCAAATCCAGTTCAACAGTGCGCTCGTGTTTCCTCTATCTCCCACGCCGAACATCACCTTCATCCGTTACTGTCAGTTTTTGGTGATTCAGAGCCGTCGCCACCGTTCACGCGCGATGAGTCTGGAAAAGAATCCTTGTGTGTTTTTCGATGTATCGGTTGATGGGGATCCGGTTGAAAGAATTGTTATTGAGCTTTTTTCTAGCGTAGTTCCCAAGACAGCTGAGAATTTCCGGGCCCTGTGTACAGGTGAGAAGGGGATTGGAGAATCTACGGGGAAACCTTTGCATTATAAAGGAACAGGTTTTCATCGTATAATTAAAGGTTTCATGGCTCAAGGTGGTGATTTTTCAAGAGGCAATGGTACAGGTGGAGAAAGTATATATGGAGGAAAATTTGCAGATGAAAATTTCAAACTTAAACATGATGGACCTGGCGTTCTTTCTATGGCTAATAGTGGTCCTAACACCAATGGATCACAGTTTTTTATTATATTCAAGCGCCAGCCTCATCTTGATGGGAAGCATGTTGTTTTTGGAAAAGTTACCAAAGGATTAGAGATTCTGAAGAAAATGGAGCAGTTGGGGACGTCAGACGGGAAACCTACCAAGCCTATTAAAATTGTTGATTGTGGTGAAGTCTCTAAAGCAAAAGGCCAGCATACAGTTGAGAAGGAGAAAGGGAAAAGAAGAAAGTCAGTAAAATCCTTAACATCTGACGATAGCTCTGATGCTGACAAAAAAATAAGTAGAAAAAGAAAAATATCTTCCAAAGACAGGAGAAAGAGAAGGAGGAGATACTCATCATCTGATAGTGACAGTGATAGTTATTCCTCAGATTCTGAATCAGATTCATCTTCAGATTCCGAATCAGATTCAGATTCTTCGTCTTCTGATTCAAGTTCTTCTAGCTATGGGAAACACCAGAAGAGGAAGAGAAATAAACGCAGGCATGGGAAGAAGAGAAGTATTGGGCGGAAACAGAAAAGAAGCCAGCACAATCGTAGAAGATCAAAACACAAGTCCAAAAGGAGTTCTGACAGTTCAAGTGACACAGAAAGTGACAGTTCTAGTGCTAGTGACAGTAGTTCTGGTGATAGGAAAGCTGATCGCCGTGTTTCTGGTCGTAAAATACAAGCCGACAAAGCTAAAAATAATCAAGACATAGGAAAGCCATCCTCTAGCCTTCCCTTACAAAGTCAAACCATTCCAGAACTAGTGGTGGATTCTAAAGTTAGAACGCCTGTGGACAAGCAATCGCACGAAGAAGGTGAATTGTCTCCAGATAATGGCGAATTTCTGAATAACGGGCATGATACTCAAGCTGAATTCACTAAACCTGCTAATCATCGGGCTTATTCAGATGATTCAAATCACAATAGAGATGTGAGTCCTGGAAGAAGTCCTGCCAAGAATTCTAGGGAGCTGAGCCAAGGACGTGCTCTAGCGGCTAGCCCTGATAAAAAATCATCTGAACCTGCTGCAGCTGCCTCCAAACATGGCCATGGCATTTCAAAAAGCCCTTCGCCAAATGGTAAGCGTGTTAAAAAAGGACGAGGCTTTACTGAGCGCTTTGCCTTTGTACGCAGATATCGTACTCCATCTCCAGAACGGTCTCCCCGTGCATATCGTTATGGGGATAGAAATGTTAGAAGGAACTTTGATAGAAATACAAGCTACAGAAGCTATTCTGAGCGCTCACCACCACGACGTTTTCGAAGCCCACCAAGGGGAAACCGTCCCAGATATCAAAGCAGAAGAAGTCAGAGCAGGAGCATCTCCCGCAGTCCAGTACGAGGCCGTTACAGAGACAATGGTCGTGGACGGAGTCCAAAACGCAGTGTTAGCCCGGAAGACAAGCGACCTCCCATAAGTGACAGATTAAAATCTCGACTTGGTGGACGAGGTAATCAACAATCTCCTGACAGACAGAGGTCAAAGTCAAATTCGAAGAGCAATGGCATTTCTCGATCCAGATCCCCTGACGATACACCCCCAAAGCGTTATAATAAAAGGACTTCCATATCTCGTAGCAGGTCTAGATCAAGTTCTGCATCAGGACAGAAGGGGTTGGTTTCCTATGGAGATGCTAGTCCTGATTCTGGAGCTAGGTAG 2154 0.4387 MDVKRNTIGPACMAQIQFNSALVFPLSPTPNITFIRYCQFLVIQSRRHRSRAMSLEKNPCVFFDVSVDGDPVERIVIELFSSVVPKTAENFRALCTGEKGIGESTGKPLHYKGTGFHRIIKGFMAQGGDFSRGNGTGGESIYGGKFADENFKLKHDGPGVLSMANSGPNTNGSQFFIIFKRQPHLDGKHVVFGKVTKGLEILKKMEQLGTSDGKPTKPIKIVDCGEVSKAKGQHTVEKEKGKRRKSVKSLTSDDSSDADKKISRKRKISSKDRRKRRRRYSSSDSDSDSYSSDSESDSSSDSESDSDSSSSDSSSSSYGKHQKRKRNKRRHGKKRSIGRKQKRSQHNRRRSKHKSKRSSDSSSDTESDSSSASDSSSGDRKADRRVSGRKIQADKAKNNQDIGKPSSSLPLQSQTIPELVVDSKVRTPVDKQSHEEGELSPDNGEFLNNGHDTQAEFTKPANHRAYSDDSNHNRDVSPGRSPAKNSRELSQGRALAASPDKKSSEPAAAASKHGHGISKSPSPNGKRVKKGRGFTERFAFVRRYRTPSPERSPRAYRYGDRNVRRNFDRNTSYRSYSERSPPRRFRSPPRGNRPRYQSRRSQSRSISRSPVRGRYRDNGRGRSPKRSVSPEDKRPPISDRLKSRLGGRGNQQSPDRQRSKSNSKSNGISRSRSPDDTPPKRYNKRTSISRSRSRSSSASGQKGLVSYGDASPDSGAR 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi17g00074 717 MobiDBLite consensus disorder prediction 594 609 - -
Vivi17g00074 717 MobiDBLite consensus disorder prediction 377 397 - -
Vivi17g00074 717 CDD cyclophilin_ABH_like 59 225 - -
Vivi17g00074 717 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 62 226 IPR002130 GO:0000413|GO:0003755
Vivi17g00074 717 MobiDBLite consensus disorder prediction 399 420 - -
Vivi17g00074 717 MobiDBLite consensus disorder prediction 229 717 - -
Vivi17g00074 717 MobiDBLite consensus disorder prediction 424 441 - -
Vivi17g00074 717 MobiDBLite consensus disorder prediction 476 492 - -
Vivi17g00074 717 SUPERFAMILY Cyclophilin-like 51 227 IPR029000 -
Vivi17g00074 717 MobiDBLite consensus disorder prediction 320 356 - -
Vivi17g00074 717 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 116 128 IPR002130 GO:0000413|GO:0003755
Vivi17g00074 717 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 174 186 IPR002130 GO:0000413|GO:0003755
Vivi17g00074 717 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 159 174 IPR002130 GO:0000413|GO:0003755
Vivi17g00074 717 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 187 202 IPR002130 GO:0000413|GO:0003755
Vivi17g00074 717 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 79 94 IPR002130 GO:0000413|GO:0003755
Vivi17g00074 717 MobiDBLite consensus disorder prediction 610 641 - -
Vivi17g00074 717 MobiDBLite consensus disorder prediction 529 572 - -
Vivi17g00074 717 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 69 225 IPR002130 GO:0000413|GO:0003755
Vivi17g00074 717 MobiDBLite consensus disorder prediction 645 673 - -
Vivi17g00074 717 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 111 128 IPR020892 GO:0003755|GO:0006457
Vivi17g00074 717 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 61 227 - -
Vivi17g00074 717 MobiDBLite consensus disorder prediction 230 265 - -
Vivi17g00074 717 MobiDBLite consensus disorder prediction 689 704 - -
Vivi17g00074 717 MobiDBLite consensus disorder prediction 285 317 - -
Vivi17g00074 717 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 53 234 - -
Vivi17g00074 717 Gene3D - 47 234 IPR029000 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi17g00074 77 223 U-box Gene Family AT5G67530 48.993 2.58e-34 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi17g00074 K09566 - gmx:100791082 762.296