Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vivi17g00058 | ATGGAAAGCTATATTGAAACAGATTTGATTGTTAATCACAAAGACACCGAGTTAAGGTTGGGATTACCGGGAAATGATGAACAAGATAAACATTCATGCAATATTGGATCGGTTGTTAGAAGCAACAAGAGGTCTTTTTCACGAGAAACAAGTGTTGAAGAGTCTTCCATCTGCAATGCTTCTAGTTCCTCAACTACAAGTGATCATGACCAAAGCAGTGTTCAACCTTCAAAGGTGCAAGTAGTTGGATGGCCACCAGTTAGATCGTTTAGGAAGAACAGTTTACAACAAAAGAAAATGGAAGATGGAAGTGGAATGTACGTGAAAGTGAGCATGGCTGGTGCACCTTACTTGAGAAAGATAGATCTTAATGTTTACAAAAGCTATTCAGAACTTCTCAAAGCTTTGGAAAATTTGTTCAAGTGCACATTTGGTGAGCATTCAGGTGAACATGCCCCTACTTATGAGGACAAGGATGGTGATTGGATGCTGGTTGGAGATGTTCCTTGGAACATGTTCTTATACTCATGCAAAAGGCTGAAGATAGTGAAAAGATCATAG | 561 | 0.3922 | MESYIETDLIVNHKDTELRLGLPGNDEQDKHSCNIGSVVRSNKRSFSRETSVEESSICNASSSSTTSDHDQSSVQPSKVQVVGWPPVRSFRKNSLQQKKMEDGSGMYVKVSMAGAPYLRKIDLNVYKSYSELLKALENLFKCTFGEHSGEHAPTYEDKDGDWMLVGDVPWNMFLYSCKRLKIVKRS | 186 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vivi17g00058 | 186 | Gene3D | - | 99 | 186 | - | - | |
Vivi17g00058 | 186 | MobiDBLite | consensus disorder prediction | 57 | 78 | - | - | |
Vivi17g00058 | 186 | SUPERFAMILY | CAD & PB1 domains | 98 | 182 | - | - | |
Vivi17g00058 | 186 | Pfam | AUX/IAA family | 148 | 186 | IPR033389 | - | |
Vivi17g00058 | 186 | Pfam | AUX/IAA family | 16 | 144 | IPR033389 | - | |
Vivi17g00058 | 186 | ProSiteProfiles | PB1 domain profile. | 105 | 186 | IPR000270 | GO:0005515 | |
Vivi17g00058 | 186 | PANTHER | AUXIN-RESPONSIVE PROTEIN IAA17 | 12 | 186 | IPR003311 | GO:0005634|GO:0006355 |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vivi17g00058 | 93 | 182 | B3 DNA Binding Superfamily | AT2G46530 | 38.542 | 2.72e-13 | 65.5 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | AUX/IAA | Vivi17g00058 | AUX_IAA | 3.5e-30 | CL0072 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vivi17g00058 | K14484 | - | gmx:100792134 | 234.958 |