Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi17g00051 ATGGAGGTTGTTGGCATGAAGAAGGAGAATATGAGATTTGAAGAAACTGAGCTAAGACTTGGAATTGGATCAGCCATAGTTTCTGAGGAAGTTGTGAGGAAGAGAGGATTTTCTGAGACTGAAACTGATCATGATGATGATGAGGAAACTACTATGGATTTGATGCTGAATCTTTCCTCTAAGGAAGCTAGTGCTGAGGTAGATCCAAATCATAAGAGCACCAAGACTTTGCCAAAAGAGAAGACTCTTTTGCTTGCAGATCCTGCAAAGCCTCCTACAAAGACGCAAGTGGTAGGTTGGCCACCAGTGCGGTCATTCAGGAAGAACATATTAGCAACACAAAAGAGTCAAGAAAGTGGCAATCCCAATTCCATTGCAATCAGCTTTGTGAAAGTTAGCATGGATGGAGCACCTTACCTCCGCAAAGTAGACTTGAAGATGTACAAAAATTACTCCCAGCTTTCTGATTCCTTAGGCAAAATGTTCAGCTCCTTCACCATTGGAAACTGTGAATCTCAAGGAATGAAGGATTTTATGAATGAGAGTAAGTTGATGGATCTTTTAAACAACTCTGATTATGTCCCAACCTATGAAGACAAGGATGGTGACTGGATGCTTGTCGGTGATGTTCCATGGGAGATGTTTGTTGAATCATGCAAACGTCTGCGTATCATGAAAGGAAAGGAGGCTATTGGTATTGCACCAAGAGCTATGGAGAAATGCAAAAACAGGAGCTAG 738 0.4173 MEVVGMKKENMRFEETELRLGIGSAIVSEEVVRKRGFSETETDHDDDEETTMDLMLNLSSKEASAEVDPNHKSTKTLPKEKTLLLADPAKPPTKTQVVGWPPVRSFRKNILATQKSQESGNPNSIAISFVKVSMDGAPYLRKVDLKMYKNYSQLSDSLGKMFSSFTIGNCESQGMKDFMNESKLMDLLNNSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGIAPRAMEKCKNRS 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi17g00051 245 FunFam Auxin-responsive protein 122 237 - -
Vivi17g00051 245 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 12 231 IPR003311 GO:0005634|GO:0006355
Vivi17g00051 245 Pfam AUX/IAA family 15 236 IPR033389 -
Vivi17g00051 245 SUPERFAMILY CAD & PB1 domains 129 226 - -
Vivi17g00051 245 Gene3D - 123 238 - -
Vivi17g00051 245 ProSiteProfiles PB1 domain profile. 127 227 IPR000270 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi17g00051 111 230 B3 DNA Binding Superfamily AT3G61830 30.833 3.78e-08 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Vivi17g00051 AUX_IAA 3.1e-81 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi17g00051 K14484 - gmx:100810013 356.295