Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi17g00048 ATGGAAATAGCATTCAACTCAACAACGGCAAGAGTTCCTTCCTTGCCGCTAACTAAATCCGACGCTCGCGATCGGAATCCGTGCTCACTGTCCATCGTTCTGCGTAACGAATTCGTGCAGCTTTCATCTTCTCCAACACGCTTTCGCACTAACAAGAATTCTCTCTTCAAGGTTTTATCTGCTGAAAAGAATCACGTTCAAGTTGTAGAAGGAAGGTTTTTTGTTGGCCTGGCTGGTCCTCCTGGTGCTGGGAAAAGCACAATAGCGCATGAAGTAGCTAGACGCATAAACAAGCTTTGGCCAGAGAAAGCTTCTTCCTTTGACTCCCAAGTTCAACCTCCTAATGTCGCTGCTGTGATTCCCATGGATGGTTTTCATCTTTATCGTTCTGAACTAGATGCAATGAAAAATCCCGAGGAAGCGCATGCCAGAAGGGGAGCTCCATGGACATTCAATCCTACGCGCCTTCTTACGTGTCTCAAGAATCTAAGAGTTCAGGGATCAGTTTATGTACCATCGTTTGATCATGGTGTTGGGGATCCAGTGGAAGATGATATCTTTGTGAACCTTCAGCATAAAATCATTATTATTGAAGGAAACTATTTGCTCCTGGAAGATGGGGTATGGAAGGAGATTTCATCTTTGTTTGATGAGAAATGGTTTATTGATATTGACATTGACAAAGCAATGCATCGAGTTTTAAAGAGGCATATCTCTACTGGCAAGCCTCGAGACATTGCGAAGCAGAGGGTAGAGAACAACGACAGACTCAATGCAGAACTTATAATGAAGTCTAAGAAAAATGCTGATATAATAATTAAGTCAGTTGATTTTTGA 837 0.4253 MEIAFNSTTARVPSLPLTKSDARDRNPCSLSIVLRNEFVQLSSSPTRFRTNKNSLFKVLSAEKNHVQVVEGRFFVGLAGPPGAGKSTIAHEVARRINKLWPEKASSFDSQVQPPNVAAVIPMDGFHLYRSELDAMKNPEEAHARRGAPWTFNPTRLLTCLKNLRVQGSVYVPSFDHGVGDPVEDDIFVNLQHKIIIIEGNYLLLEDGVWKEISSLFDEKWFIDIDIDKAMHRVLKRHISTGKPRDIAKQRVENNDRLNAELIMKSKKNADIIIKSVDF 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi17g00048 278 PANTHER URIDINE KINASE 54 272 - -
Vivi17g00048 278 Pfam Phosphoribulokinase / Uridine kinase family 75 276 IPR006083 GO:0005524|GO:0016301
Vivi17g00048 278 Gene3D - 100 165 IPR027417 -
Vivi17g00048 278 Gene3D - 166 278 IPR027417 -
Vivi17g00048 278 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 276 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi17g00048 59 273 PRT Gene Family AT1G55810 24.775 3.12e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi17g00048 - - gmx:100798850 432.18