Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi17g00047 ATGGAAATAGCATTCAACTCAACAACGGCAAGAGTTCCTTCCTTGCCGCTAACTAAATCCGACGCTCGCGATCGGAATCCGTGCTCACTGTCCATCGTTCTGCGTAACGAATTCGTGCAGCTTTCATCTTCTCCAACACGCTTTCGCACTAACAAGAATTCTCTCTTCAAGGTTTTATCTGCTGAAAAGAATCACGTTCAAGTTGTAGAAGGAAGTAGTGTTGATGAGATCTATGATGCATTGGTTAATCGAATTCTGCCTCTGCCGTCAGTGTCGTTAAATCCTAATTATAAGTTTTTTGTTGGCCTGGCTGGTCCTCCTGGTGCTGGGAAAAGCACAATAGCGCATGAAGTAGCTAGACGCATAAACAAGCTTTGGCCAGAGAAAGCTTCTTCCTTTGACTCCCAAGTTCAACCTCCTAATGTCGCTGCTGTGATTCCCATGGATGGTTTTCATCTTTATCGTTCTGAACTAGATGCAATGAAAAATCCCGAGGAAGCGCATGCCAGAAGGGGAGCTCCATGGACATTCAATCCTACGCGCCTTCTTACGTGTCTCAAGAATCTAAGAGTTCAGGGATCAGTTTATGTACCATCGTTTGATCATGGTGTTGGGGATCCAGTGGAAGATGATATCTTTGTGAACCTTCAGCATAAAATCATTATTATTGAAGGAAACTATTTGCTCCTGGAAGATGGGGTATGGAAGGAGATTTCATCTTTGTTTGATGAGAAATGGTTTATTGATATTGACATTGACAAAGCAATGCATCGAGTTTTAAAGAGGCATATCTCTACTGGCAAGCCTCGAGACATTGCGAAGCAGAGGGTAGAGAACAACGACAGACTCAATGCAGAACTTATAATGAAGTCTAAGAAAAATGCTGATATAATAATTAAGTCAGTTGATTTTTGA 915 0.4208 MEIAFNSTTARVPSLPLTKSDARDRNPCSLSIVLRNEFVQLSSSPTRFRTNKNSLFKVLSAEKNHVQVVEGSSVDEIYDALVNRILPLPSVSLNPNYKFFVGLAGPPGAGKSTIAHEVARRINKLWPEKASSFDSQVQPPNVAAVIPMDGFHLYRSELDAMKNPEEAHARRGAPWTFNPTRLLTCLKNLRVQGSVYVPSFDHGVGDPVEDDIFVNLQHKIIIIEGNYLLLEDGVWKEISSLFDEKWFIDIDIDKAMHRVLKRHISTGKPRDIAKQRVENNDRLNAELIMKSKKNADIIIKSVDF 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi17g00047 304 Gene3D - 127 304 IPR027417 -
Vivi17g00047 304 PANTHER URIDINE KINASE 65 298 - -
Vivi17g00047 304 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 53 302 IPR027417 -
Vivi17g00047 304 Pfam Phosphoribulokinase / Uridine kinase family 101 302 IPR006083 GO:0005524|GO:0016301
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi17g00047 99 299 PRT Gene Family AT1G55810 25.000 5.76e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi17g00047 - - gmx:100798850 485.337