Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi17g00046 ATGGAAATAGCATTCAACTCAACAACGGCAAGAGTTCCTTCCTTGCCGCTAACTAAATCCGACGCTCGCGATCGGAATCCGTGCTCACTGTCCATCGTTCTGCGTAACGAATTCGTGCAGCTTTCATCTTCTCCAACACGCTTTCGCACTAACAAGAATTCTCTCTTCAAGGTTTTATCTGCTGAAAAGAATCACGTTCAAGTTGTAGAAGGAAGTAGTGTTGATGAGATCTATGATGCATTGGTTAATCGAATTCTGCCTCTGCCGTCAGTGTCGTTAAATCCTAATTATAAAAGATTTCTTGGTTTGTCACTACTTAAACTCATGTTTTTTGTTGGCCTGGCTGGTCCTCCTGGTGCTGGGAAAAGCACAATAGCGCATGAAGTAGCTAGACGCATAAACAAGCTTTGGCCAGAGAAAGCTTCTTCCTTTGACTCCCAAGTTCAACCTCCTAATGTCGCTGCTGTGATTCCCATGGATGGTTTTCATCTTTATCGTTCTGAACTAGATGCAATGAAAAATCCCGAGGAAGCGCATGCCAGAAGGGGAGCTCCATGGACATTCAATCCTACGCGCCTTCTTACGTGTCTCAAGAATCTAAGAGTTCAGGGATCAGTTTATGTACCATCGTTTGATCATGGTGTTGGGGATCCAGTGGAAGATGATATCTTTGTGAACCTTCAGCATAAAATCATTATTATTGAAGGAAACTATTTGCTCCTGGAAGATGGGGTATGGAAGGAGATTTCATCTTTGTTTGATGAGAAATGGTTTATTGATATTGACATTGACAAAGCAATGCATCGAGTTTTAAAGAGGCATATCTCTACTGGCAAGCCTCGAGACATTGCGAAGCAGAGGGTAGAGAACAACGACAGACTCAATGCAGAACTTATAATGAAGTCTAAGAAAAATGCTGATATAATAATTAAGTCAGTTGATTTTTGA 948 0.4167 MEIAFNSTTARVPSLPLTKSDARDRNPCSLSIVLRNEFVQLSSSPTRFRTNKNSLFKVLSAEKNHVQVVEGSSVDEIYDALVNRILPLPSVSLNPNYKRFLGLSLLKLMFFVGLAGPPGAGKSTIAHEVARRINKLWPEKASSFDSQVQPPNVAAVIPMDGFHLYRSELDAMKNPEEAHARRGAPWTFNPTRLLTCLKNLRVQGSVYVPSFDHGVGDPVEDDIFVNLQHKIIIIEGNYLLLEDGVWKEISSLFDEKWFIDIDIDKAMHRVLKRHISTGKPRDIAKQRVENNDRLNAELIMKSKKNADIIIKSVDF 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi17g00046 315 Pfam Phosphoribulokinase / Uridine kinase family 112 313 IPR006083 GO:0005524|GO:0016301
Vivi17g00046 315 Gene3D - 138 203 IPR027417 -
Vivi17g00046 315 Gene3D - 204 315 IPR027417 -
Vivi17g00046 315 PANTHER URIDINE KINASE 102 309 - -
Vivi17g00046 315 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 313 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi17g00046 110 310 PRT Gene Family AT1G55810 25.000 6.04e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi17g00046 - - gmx:100798850 476.863