Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi17g00037 ATGGCTCTTGCTGGTTCTGAAATAGAGCTTAAACTTCAAGCTATAAACAACAAGAAAACCGCAATTTCAAGAAGCTGGATTTTACTTGATCGTGATGGAAGAGACATGGTATTGGATGTGGATAAGTATGCTATTATGCGTCTGGTTGAAATTCACGCAAGAGATCTTCGAATTATGGATCCTCTTCTTTCTTATCCTTCTACCATTCTTGGCAGAGAGAAAGTCATTGTTCTCAATCTAGAGCATATAAAAGCTATTATCACTGCTGAAGAAGTATTGGTTAGAGACCCAATGGATGAGGAAGTTGTGCCTGTTGTTGAAGAGCTACGAAGAAGGTTACCAGTGAAAGTAAGTGTTACTGGTCAAGGACAAGGACAAGGAGAAGAAGAGTCGTGTGCTCAAGACGGTGGAGAAGAAAATGAATTTCCATTTGAGTTTCGGGCGTTGGAAGTTGTATTAGAGGCAACTTGTAGTTTTCTTGATGCAAGGACAAGAGAGTTGGAGACTAATGTTTATCCGGCTCTGGATGAACTTACATCTAAGATCAGTAGTCGTAATTTGGATAAAGTTCGGAAACTAAAAAGTGCAATGACTAGATTAACAAATCGGGTTCATAAGATTAGAGAGGAATTAGAAAATCTACTTGATGATGATGACGACATGGCTGAACTTTACTTATCAAGAAAGTTATGTGTTTCATCCTCTCCGTCGAGTAGCTCTGAAGGTCCTAATTGGCATCATAGTCCAAATCAAGGTTCAAAAATACACAGATCAAGCAGAGGAAGCGCTGCAACACTTCATGGAGAAAATGACGTTGAAGAGCTTGAAATGTTATTAGAGGCCTATTTCATACAAATTGATGGTACATTAAATAAATTAACCACGGTACGAGAATACATCGACGATACAGAAGATTACATCAACATACAACTTGATAATCACCGAAATCAACTGATTCAGCTAGAGTTGTTCCTAAGTTCTGGGACTGTTTGTTTATCAATATATTCACTGGTGGCTGCAATATTTGGTATGAATATTCCATATACATGGAGAGAAGGTCATGGATATGTATTTAAATGGGTGGTGATTCTTACGGGAATGGCTTGTGGAACATTCTTTTTGTCCATAGTATCTTATGCTCGACGCAAAGGTCTTGTTGGATCTTGA 1167 0.3839 MALAGSEIELKLQAINNKKTAISRSWILLDRDGRDMVLDVDKYAIMRLVEIHARDLRIMDPLLSYPSTILGREKVIVLNLEHIKAIITAEEVLVRDPMDEEVVPVVEELRRRLPVKVSVTGQGQGQGEEESCAQDGGEENEFPFEFRALEVVLEATCSFLDARTRELETNVYPALDELTSKISSRNLDKVRKLKSAMTRLTNRVHKIREELENLLDDDDDMAELYLSRKLCVSSSPSSSSEGPNWHHSPNQGSKIHRSSRGSAATLHGENDVEELEMLLEAYFIQIDGTLNKLTTVREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCLSIYSLVAAIFGMNIPYTWREGHGYVFKWVVILTGMACGTFFLSIVSYARRKGLVGS 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi17g00037 388 Gene3D Magnesium transport protein CorA, transmembrane region 103 318 - -
Vivi17g00037 388 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 324 374 IPR045863 -
Vivi17g00037 388 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 18 386 IPR039204 -
Vivi17g00037 388 Pfam CorA-like Mg2+ transporter protein 273 373 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vivi17g00037 388 Coils Coil 190 217 - -
Vivi17g00037 388 Gene3D - 9 97 - -
Vivi17g00037 388 MobiDBLite consensus disorder prediction 234 263 - -
Vivi17g00037 388 FunFam Magnesium transporter MRS2-1 14 97 - -
Vivi17g00037 388 CDD Mrs2_Mfm1p-like 26 385 IPR039204 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi17g00037 18 361 MRS2 Gene Family AT5G64560 75.072 1.30e-166 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi17g00037 K16075 - gmx:100799368 551.206