LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi17g00013	ATGTTTTTTATAAGACCCTTTTATGCCTCTTATTCCCATTGTCCCACTTCCATCTCACTCACTCACTTCTCACATTTTAGTATTTACAACCTTTCACCATTTCCTAGTGTGTCCGTGTGCCTACAAATTTTATTCTCTTTTCTTTTTTCTCTTCTCACACACATACCTAACACACCCTTTCTCAACATGGCTTCTTCAAATGGAACTAGCTCCGGAACCGGTTCTCCTTGTGGAGCATGCAAATTCCTAAGAAGAAAATGTGCACCTGATTGCATTTTTGCACCTTACTTTTGCTCAGAACAAGGCCCTGCTAGATTTGCAGCCATTCATAAAGTTTTTGGTGCCAGCAATGTCTCTAAGCTGCTTTTGCATATTCCAGCTCATGAACGTTGTGAAGCTGTTGTCACAATCGCTTATGAGGCTCAAGCTCGTATTAGAGATCCTGTCTATGGCTGTGTCTCTCACATTTTTGCCTTACAACAACAGGTAGCATGCTTGCAGACACAACTGATTCAAGTGAAATCTCAGCTGACACAAAACATAGAGAATTGTAATAATAATAATAATAATAATCATCAATGGACAGGGAATAATGATAATGTTGTTGGAACACAACAAATGAATTATCATCCTTTTTGTCCAACTTACATGAACCCTATATCTCCTCAAAGCTCACTTGAGTCATCAATTGATCATAGTGGAAGCATGAATGATGGAATGATGAACATGCAAGATGTACAAAGTACTAGTAGAGAGGATTTCTCATTCCAAGGTTGTAATAGTTCTAAGAAAAGAATGTTGTATAACAATAATAATAGTCATGACTTGGGTGAGTTGCAAGAATTGGCTCTTAGGATGATGAGGAACTAA	870	0.3793	MFFIRPFYASYSHCPTSISLTHFSHFSIYNLSPFPSVSVCLQILFSFLFSLLTHIPNTPFLNMASSNGTSSGTGSPCGACKFLRRKCAPDCIFAPYFCSEQGPARFAAIHKVFGASNVSKLLLHIPAHERCEAVVTIAYEAQARIRDPVYGCVSHIFALQQQVACLQTQLIQVKSQLTQNIENCNNNNNNNHQWTGNNDNVVGTQQMNYHPFCPTYMNPISPQSSLESSIDHSGSMNDGMMNMQDVQSTSREDFSFQGCNSSKKRMLYNNNNSHDLGELQELALRMMRN	289

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi17g00013	289	ProSiteProfiles	LOB domain profile.	75	177	IPR004883	-
	Vivi17g00013	289	Pfam	Lateral organ boundaries (LOB) domain	76	174	IPR004883	-
	Vivi17g00013	289	PANTHER	LOB DOMAIN CONTAINING PROTEIN	72	281	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi17g00013	63	289	AS2 family	AT2G42430	53.846	1.25e-78	237

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	LOB	Vivi17g00013		LOB	7.4e-37	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi17g00013	K13944		-	gmx:100801508	325.865