Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi17g00011 ATGACTGGTTCCGGTTCTCCTTGTGGAGCTTGTAAATTCTTGAGGAGAAAATGTATTAGAGGTTGTGTTTTTGCACCTTACTTTTGCCATGAACAAGGTGCTACTCATTTTGCAGCTATTCATAAGGTCTTTGGTGCAAGTAATGTTTCAAAACTTCTTGCACACCTCCCTGTGACTGATCGTTGTGAAGCTGCTGTCACAATCTCTTATGAAGCTCAAGCTAGACTTCAAGATCCAATTTATGGATGTGTTTCTCATATTTTTGCACTTCAACAACAGGTGGTAAATTTACAAGCTCAACTAGCTTATATGAAGGAACAAGCAGCTCAAAGGTGTCTCAATACTTTAATCTCTGAAAACCCTAATGAGAAAAGCTTTGTAAAACCTAATAATATTCTCCCTCATGATCTTCAAAGTTGGTTCCAAATGGAAAATGATTCCAACATGAGTCCTCAATTTGATCCCAACTTGTCCTCCTCCACTACTAATCTCTCAACAACACCACAATATTATAATGGGAATGCAACCACTCTCATGGACCTAAACCCTATAATTGGAAACTATGAAAATTCAGGAACTTTAGAAGAAAGCATCTCATCATTTTGTAACTTTGAAGAGAGATGTAATAACTCAATGTCCTCCTGTCATGACATGCAAAGGCAGTGGGCCTTTCATGAAATGAATAATTTTCAGTAA 696 0.375 MTGSGSPCGACKFLRRKCIRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLAHLPVTDRCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLAYMKEQAAQRCLNTLISENPNEKSFVKPNNILPHDLQSWFQMENDSNMSPQFDPNLSSSTTNLSTTPQYYNGNATTLMDLNPIIGNYENSGTLEESISSFCNFEERCNNSMSSCHDMQRQWAFHEMNNFQ 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi17g00011 231 Coils Coil 87 107 - -
Vivi17g00011 231 Pfam Lateral organ boundaries (LOB) domain 7 105 IPR004883 -
Vivi17g00011 231 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Vivi17g00011 231 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 194 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi17g00011 7 201 AS2 family AT3G58190 54.774 4.77e-70 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Vivi17g00011 LOB 1.6e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi17g00011 K13945 - gmx:100776678 324.324