Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi17g00009 ATGGGTAGCAATTTACATCAACTACTCAGAAGTCTTTGTTTCAATACTCATTGGAATTATGCTATATTTTGGAAGCTCAAACATTGTGCTCCAAATCCAATGATCTTAACATTGGAGGATGCTTACTATGATAATTCAGATTATTTTGGCTCTTCAGAAAATAAGTACTGTCAAAAGGCCTTGGAACAGATTAAGGGTGGGAAGTTTTCTCATGAGGCTTTGGGGTTAGCTGTGGCAAAGATGTCGAATAATGTATACTCATTAGGGGAAGGTGTTGTTGGACAGGTAGCTGTTACTGGAAAACATCGGTGGATCTGTGCAGATGATCAAGTTACAAGTTCTGGCTTGTCTTTTGAGTTTGATGATTTGTGGCAAACTCAGTTTTCGGCTGGAATTAGGACAATTGTTGTTGTGTCTGTAGTTCCACTCGGCGTTGTTCAGCTTGGATCTCTAATAAAAGATATCTTGAAGGAAAAATCATCTTCAGATATTATGCCTGCATGCATGACGAATGAAACAGTGGATGTTTTGATGCCCCTTCAATGTTCTGGGAGGAGCAGTGCAACTAATTCTGCTTATTGGGAAATGGGTGATAATGTGATCAAGCACGAAGTACCCGAGCTCAATAATGATGTGAGTCCCATTTTGCTTCAGTCGACGTTTGATATGATTAACGTGGAGCATCAGGAATTTGGAGAGATAAGGCCTCTAAGTGCGAGGGAGTGTGCGGGGGGCAGTGATGGCTACAAAAATATGAGATTGGAATCGGAACAAAATTTATCATCATTTTTGAACAATTCTCTTATAAATAATGATGGCGTTAGCGATTTGATACACCATTCAGAAAAGTCCAGAGTTGATTCTGCATGCTTTCCTACAGATTTTCTAGAAGCATATGTTTCTGAAAGTGACAAATCTCATAAACACTGCAAAAAGTCAGAGTTTTGGACTGTGCCTTGTGGCAAGGATACCTCCTATACACAGTTGAGTTTTCCGGCTGGCTGTGAACTACACGAAGCACTTGGACCAGCATCTTTGAAAGGGAGTAAATATATGGATTCGCTGGCACAGGTTAATCAAGATGTGAGAATTGTGGATATGCCAGACACAGTTAACCCTAGTCAATCAACTTCAGAGCATCTTTTGGAAGCAATGGTGGCCAACATTTGTCACAGTAGTAATAATGATGTTAATAGTGAATCATCATTTTATAGATCAAAGCAATCTGCAATAAGTTCTGGCAAAAAACCTGAAGTTTCTATTCAAAATGTGCATACTGTTAATCCAGAAAGCTATTCAATAGATCATCCTTCTCTTTTCAGAGAGGAAAAACACCATTGTTTGAGCTCATCGTCAGGGGTATGCGGTGTTATGTCATCTCAAGGCATTTCATCTATATGTCCCAGTGCTTGTAGTGAACAACTCGAAAGGTCATCTGAACCATCTAAGAACATCAAGAAGAGGGCTAGACCTGGAGAAAGTTGCAGACCTCGGCCAAGAGACAGGCAACTGATCCAAGATCGAATTAAGGAGCTGAGAGAGTTGGTTCCAAATGGTGCAAAGTGCAGTATTGATTCACTACTGGAGCGCTCGATAAAGCACATGCTCTTTCTGCAAAGCATAACTAAGCATGCTGACAAGCTAACAAAATTCGCTGATTCTAAATCAAAGTTACATCATGTGGAAGCAGACATTCTCGGATCCTCTAGTAGTGACCAGGGTTCGAGCTGGGCAATGGAGGTAGGGGGTCATCTAAAAGTTCATTCAATATTAGTGGAGAATCTTAGCAAGAACGGACAAATGCTTGTTGAGATGCTATGTGAAGAATGGAGCCATTTTCTTGAAATAGCGGAAGCCATAAGAAGCTTAGGCCTTACAATTTTGAAGGGTGCAACAAAAACTCGCGATGACAAGATGTTAATATGCTTTATTGTTGAGGTTGAAAACAACAAAAATGTACACCGACTGGACATCTTGTGGCCGCTTGTTCAGATACTGCAATCCAAGAGCACTGCAGCAACAGTAACTGGATGA 2034 0.4061 MGSNLHQLLRSLCFNTHWNYAIFWKLKHCAPNPMILTLEDAYYDNSDYFGSSENKYCQKALEQIKGGKFSHEALGLAVAKMSNNVYSLGEGVVGQVAVTGKHRWICADDQVTSSGLSFEFDDLWQTQFSAGIRTIVVVSVVPLGVVQLGSLIKDILKEKSSSDIMPACMTNETVDVLMPLQCSGRSSATNSAYWEMGDNVIKHEVPELNNDVSPILLQSTFDMINVEHQEFGEIRPLSARECAGGSDGYKNMRLESEQNLSSFLNNSLINNDGVSDLIHHSEKSRVDSACFPTDFLEAYVSESDKSHKHCKKSEFWTVPCGKDTSYTQLSFPAGCELHEALGPASLKGSKYMDSLAQVNQDVRIVDMPDTVNPSQSTSEHLLEAMVANICHSSNNDVNSESSFYRSKQSAISSGKKPEVSIQNVHTVNPESYSIDHPSLFREEKHHCLSSSSGVCGVMSSQGISSICPSACSEQLERSSEPSKNIKKRARPGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLERSIKHMLFLQSITKHADKLTKFADSKSKLHHVEADILGSSSSDQGSSWAMEVGGHLKVHSILVENLSKNGQMLVEMLCEEWSHFLEIAEAIRSLGLTILKGATKTRDDKMLICFIVEVENNKNVHRLDILWPLVQILQSKSTAATVTG 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi17g00009 677 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 489 538 IPR011598 GO:0046983
Vivi17g00009 677 MobiDBLite consensus disorder prediction 479 502 - -
Vivi17g00009 677 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 222 672 IPR043561 GO:0003700|GO:0006355
Vivi17g00009 677 MobiDBLite consensus disorder prediction 477 502 - -
Vivi17g00009 677 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 151 IPR025610 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi17g00009 222 670 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 40.486 8.76e-84 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi17g00009 - - mtr:25499239 916.761