Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi17g00008 ATGGGTAGCAATTTACATCAACTACTCAGAAGTCTTTGTTTCAATACTCATTGGAATTATGCTATATTTTGGAAGCTCAAACATTGTGCTCCAAATCCAATGATCTTAACATTGGAGGATGCTTACTATGATAATTCAGATTATTTTGGCTCTTCAGAAAATAAGTACTGTCAAAAGGCCTTGGAACAGATTAAGGGTGGGAAGTTTTCTCATGAGGCTTTGGGGTTAGCTGTGGCAAAGATGTCGAATAATGTATACTCATTAGGGGAAGGTGTTGTTGGACAGGTAGCTGTTACTGGAAAACATCGGTGGATCTGTGCAGATGATCAAGTTACAAGTTCTGGCTTGTCTTTTGAGTTTGATGATTTGTGGCAAACTCAGTTTTCGGCTGGAATTAGGACAATTGTTGTTGTGTCTGTAGTTCCACTCGGCGTTGTTCAGCTTGGATCTCTAATAAAAGTGAATGAAGATATGGGAGTTATTAATTATATAAGAAACCTTTTTTTGTCTACTCAAGATTACTCAATAGACCACATTCCTAGTCAAATACAACATAGTTTGAAGAGCTCTTCATCTCATGATATCTTGAAGGAAAAATCATCTTCAGATATTATGCCTGCATGCATGACGAATGAAACAGTGGATGTTTTGATGCCCCTTCAATGTTCTGGGAGGAGCAGTGCAACTAATTCTGCTTATTGGGAAATGGGTGATAATGTGATCAAGCACGAAGTACCCGAGCTCAATAATGATGTGAGTCCCATTTTGCTTCAGTCGACGTTTGATATGATTAACGTGGAGCATCAGGAATTTGGAGAGATAAGGCCTCTAAGTGCGAGGGAGTGTGCGGGGGGCAGTGATGGCTACAAAAATATGAGATTGGAATCGGAACAAAATTTATCATCATTTTTGAACAATTCTCTTATAAATAATGATGGCGTTAGCGATTTGATACACCATTCAGAAAAGTCCAGAGTTGATTCTGCATGCTTTCCTACAGATTTTCTAGAAGCATATGTTTCTGAAAGTGACAAATCTCATAAACACTGCAAAAAGTCAGAGTTTTGGACTGTGCCTTGTGGCAAGGATACCTCCTATACACAGTTGAGTTTTCCGGCTGGCTGTGAACTACACGAAGCACTTGGACCAGCATCTTTGAAAGGGAGTAAATATATGGATTCGCTGGCACAGGTTAATCAAGATGTGAGAATTGTGGATATGCCAGACACAGTTAACCCTAGTCAATCAACTTCAGAGCATCTTTTGGAAGCAATGGTGGCCAACATTTGTCACAGTAGTAATAATGATGTTAATAGTGAATCATCATTTTATAGATCAAAGCAATCTGCAATAAGTTCTGGCAAAAAACCTGAAGTTTCTATTCAAAATGTGCATACTGTTAATCCAGAAAGCTATTCAATAGATCATCCTTCTCTTTTCAGAGAGGAAAAACACCATTGTTTGAGCTCATCGTCAGGGGTATGCGGTGTTATGTCATCTCAAGGCATTTCATCTATATGTCCCAGTGCTTGTAGTGAACAACTCGAAAGGTCATCTGAACCATCTAAGAACATCAAGAAGAGGGCTAGACCTGGAGAAAGTTGCAGACCTCGGCCAAGAGACAGGCAACTGATCCAAGATCGAATTAAGGAGCTGAGAGAGTTGGTTCCAAATGGTGCAAAGTGCAGTATTGATTCACTACTGGAGCGCTCGATAAAGCACATGCTCTTTCTGCAAAGCATAACTAAGCATGCTGACAAGCTAACAAAATTCGCTGATTCTAAATCAAAGTTACATCATGTGGAAGCAGACATTCTCGGATCCTCTAGTAGTGACCAGGGTTCGAGCTGGGCAATGGAGGTAGGGGGTCATCTAAAAGTTCATTCAATATTAGTGGAGAATCTTAGCAAGAACGGACAAATGCTTGTTGAGATGCTATGTGAAGAATGGAGCCATTTTCTTGAAATAGCGGAAGCCATAAGAAGCTTAGGCCTTACAATTTTGAAGGGTGCAACAAAAACTCGCGATGACAAGATGTTAATATGCTTTATTGTTGAGGTTGAAAACAACAAAAATGTACACCGACTGGACATCTTGTGGCCGCTTGTTCAGATACTGCAATCCAAGAGCACTGCAGCAACAGTAACTGGATGA 2154 0.4006 MGSNLHQLLRSLCFNTHWNYAIFWKLKHCAPNPMILTLEDAYYDNSDYFGSSENKYCQKALEQIKGGKFSHEALGLAVAKMSNNVYSLGEGVVGQVAVTGKHRWICADDQVTSSGLSFEFDDLWQTQFSAGIRTIVVVSVVPLGVVQLGSLIKVNEDMGVINYIRNLFLSTQDYSIDHIPSQIQHSLKSSSSHDILKEKSSSDIMPACMTNETVDVLMPLQCSGRSSATNSAYWEMGDNVIKHEVPELNNDVSPILLQSTFDMINVEHQEFGEIRPLSARECAGGSDGYKNMRLESEQNLSSFLNNSLINNDGVSDLIHHSEKSRVDSACFPTDFLEAYVSESDKSHKHCKKSEFWTVPCGKDTSYTQLSFPAGCELHEALGPASLKGSKYMDSLAQVNQDVRIVDMPDTVNPSQSTSEHLLEAMVANICHSSNNDVNSESSFYRSKQSAISSGKKPEVSIQNVHTVNPESYSIDHPSLFREEKHHCLSSSSGVCGVMSSQGISSICPSACSEQLERSSEPSKNIKKRARPGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLERSIKHMLFLQSITKHADKLTKFADSKSKLHHVEADILGSSSSDQGSSWAMEVGGHLKVHSILVENLSKNGQMLVEMLCEEWSHFLEIAEAIRSLGLTILKGATKTRDDKMLICFIVEVENNKNVHRLDILWPLVQILQSKSTAATVTG 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi17g00008 717 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 529 578 IPR011598 GO:0046983
Vivi17g00008 717 MobiDBLite consensus disorder prediction 517 542 - -
Vivi17g00008 717 MobiDBLite consensus disorder prediction 519 542 - -
Vivi17g00008 717 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 712 IPR043561 GO:0003700|GO:0006355
Vivi17g00008 717 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 168 IPR025610 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi17g00008 1 710 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 39.198 2.35e-143 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi17g00008 - - mtr:25499239 988.408