Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi178g00003 ATGGAATCCAATAATTCACCTCTCAACCAAACAAAACTTGTGCATCCAAACAATAACCATGATCATGAACAAAATGCAACCCTAGAGATCGAAAGCGACGAATTTGATTACTCGAAAAGATCACAATGGCTTCGCGCCGCGGTTCTAGGAGCCAACGATGGACTAGTTTCAACAGCATCTTTAATGATGGGTGTAGGAGCAGTGAAACAAGACATCAAAGCCATGATCTTGTCCGGTTTCGCAGGACTCGTAGCCGGTGCTTGTAGCATGGCAATAGGTGAGTTTGTATCTGTTTACTCACAGCTTGACATTGAAATAGCTCAATTAAAAAGAGACAAAAACATTGAGAACAGTAACAATATTGAAGATGTTGTTATTGAGAAAGAAAGTTTGCCAAATCCTTTACAAGCTGCAGCTGCTTCAGCTTTAGCATTTTCAATTGGTGCAATGGTGCCACTTCTTGCAGCATCTTTTATTAAAGATTATAAGTTGAGAGTAGGTGTTGTTTTGGTAGCAGTTAGTTTTGCTTTGGTTGTGTTTGGTTTGTTGGGAGCAGTGTTGGGTAAGGCACCAGTTTTGAAGTCTTGTTTGAGGGTCTTGCTTGGAGGTTGGATTGCTATGGCTATTACTTTTGGGCTAACTAAGTTGATCGGCTCAAGTGGTCTTTAG 669 0.4081 MESNNSPLNQTKLVHPNNNHDHEQNATLEIESDEFDYSKRSQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKAMILSGFAGLVAGACSMAIGEFVSVYSQLDIEIAQLKRDKNIENSNNIEDVVIEKESLPNPLQAAAASALAFSIGAMVPLLAASFIKDYKLRVGVVLVAVSFALVVFGLLGAVLGKAPVLKSCLRVLLGGWIAMAITFGLTKLIGSSGL 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi178g00003 222 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 20 217 IPR008217 GO:0005384|GO:0030026
Vivi178g00003 222 CDD Nodulin-21 42 191 - -
Vivi178g00003 222 MobiDBLite consensus disorder prediction 1 15 - -
Vivi178g00003 222 MobiDBLite consensus disorder prediction 1 23 - -
Vivi178g00003 222 Pfam VIT family 127 214 IPR008217 GO:0005384|GO:0030026
Vivi178g00003 222 Pfam VIT family 44 122 IPR008217 GO:0005384|GO:0030026
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi178g00003 1 222 Nodulin-like Gene Family AT3G43660 64.444 7.10e-100 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi178g00003 K22736 - gmx:100814343 306.99