Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1780g00001 ATGCCGTTGAAGATTCTAACCACTCCTTCACCGGCTAAAGCTGGAACCAAGCGTGCCATCGAGTTTCAAACCACTGGAACCAAGCGCGCGACTGATAACAACGACACTGACTCTGACTCTTCTAAGCATTTGAAGAAGAAAGCAAACAAAACTGAACATCGTGGTTCCGGTGACGAGAAGGAAGCGGCAAGAGACTCTATCAAAAAGATGTTGGCTCAGAGACTATTCAGCGAGGAAGACGAACTCGCCATTCTAAAAGGTCTAGCTGATTTCATTTCCCTAACTAAAAATGATCCTATGAAAAACACACAAGCATTTTACAATTTTGTGAAGAAATCTATTCGAGCAGACGCTAAAAAGGATCAACTGAGGCGTAAGGTTCGTGTTCTGAAGAAAAAGTTTGAAAGCAATGGTGAAAATTTCACCAAAGAACATGATCAGAAAGCTTTTGAACTTTTCAAGAAGATTTCTGATCAAAAGCTTTCACCATTGCTTACAAAATTTATCTTATATGTAACTTGTATTTTTTTTTAA 534 0.3895 MPLKILTTPSPAKAGTKRAIEFQTTGTKRATDNNDTDSDSSKHLKKKANKTEHRGSGDEKEAARDSIKKMLAQRLFSEEDELAILKGLADFISLTKNDPMKNTQAFYNFVKKSIRADAKKDQLRRKVRVLKKKFESNGENFTKEHDQKAFELFKKISDQKLSPLLTKFILYVTCIFF 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1780g00001 177 MobiDBLite consensus disorder prediction 32 64 - -
Vivi1780g00001 177 PANTHER BNAANNG10740D PROTEIN-RELATED 41 156 IPR007592 GO:0006355
Vivi1780g00001 177 MobiDBLite consensus disorder prediction 1 64 - -
Vivi1780g00001 177 Pfam Protein of unknown function, DUF573 73 156 IPR007592 GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1780g00001 11 156 GeBP Transcription Factor Family AT1G61730 36.250 7.55e-19 80.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Vivi1780g00001 DUF573 8.2e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1780g00001 - - vvo:131642865 327.405