Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1750g00006 ATGCGACTGAAGGCCATAATTGCAAATGGAAATACGTGTGTAAACCAAATTAAATGGACAAATTCAAATGGTTTAAAATCCATTTCCTTAAATGAATTGAACTCGTTTGTGAGTAATCTTCTCATTGAAGTGAAGCTTCATATTCTTCTGCTTGATCAATTTATCAGTAAGGATCAACTCCCTCCATGGGTTGAGTCGGAGGATGTATCATCACTTCATACAAGTGGATTTCATGTCGTGGATGTTTTTGTTGCAATAGATGGAACTGGAAATTTCATTAGAATGGTTGATGCAATGTGGTCTTTACCTTTTCGCATCACGAGACGTTATGCCATTCACGTGAAAGATTGGGTTTATAATGAACACATTATTGCTGATCAAGATGAATGGAACATTGTCATTGTTTGA 408 0.3603 MRLKAIIANGNTCVNQIKWTNSNGLKSISLNELNSFVSNLLIEVKLHILLLDQFISKDQLPPWVESEDVSSLHTSGFHVVDVFVAIDGTGNFIRMVDAMWSLPFRITRRYAIHVKDWVYNEHIIADQDEWNIVIV 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1750g00006 135 Pfam Pectinesterase 81 135 IPR000070 GO:0030599|GO:0042545
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1750g00006 3 135 Carbohydrate Esterase AT3G43270 32.877 3.80e-16 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1750g00006 K01051 - vvo:131642742 248.825