Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi173g00022 ATGGAATTTGAGTCACAGGAAAATGCATATTCATTCTACATTGATTATGCTAAATCAGTTGGGTTTGGAATTTCAATTAAAACTAGTCGTCGATCAAAGGTTTCTATGGAGTTTATCGATATTACATATGCTTGCACAAGATATGGAAAAAAGAGACCATCCATTGCACATAATCCACGTCCTTGTTTGAAGTTGGAGTGTGAAGCTAGCTTGCGTATTAAAAGAAACTGTGATGGCAAGTGGAGTATTCACAGTTTCATTAAAGATCACAATCATGATCTTTTTCCAACATATGCACATTATTTCCCTTGCCATAGAAGAATCAATAAAGCTCAAAAGAATTGTATTGAAACTTTACAACAAGTTGGGGTGAGAACAACAAAAATTTACGCCACAATGGCCAAACAACATGGAGGATATGAAAATATTGGTTGTTTGGAGAAAGATGTTAGAAATCATTTAGATAAAGATCGTCTTTTGAGTTTAGAATTGGGAGATGCAACTGCAATGTTGGAGTGTTTTATGCTTATGCAAGAAGAAAATCCAAGATTTTTTTATGCAATTGATTTGGATGATGAAAACCGTCTTAAAAATGTGTTTTGGGTAGATGCAAAAGGAAGAGATGATTATCAAGAGTTTGGAGATGTGATCTCATTCGATACAACATATATCACTAATAAGTACAAAATGCCATTTGCTCCTTTTATTGGTGTGAATAATCACTTTCAGTCAAGATTACTTGGTTGCGCGTTACTAGTTGATGAAACCTGA 771 0.3411 MEFESQENAYSFYIDYAKSVGFGISIKTSRRSKVSMEFIDITYACTRYGKKRPSIAHNPRPCLKLECEASLRIKRNCDGKWSIHSFIKDHNHDLFPTYAHYFPCHRRINKAQKNCIETLQQVGVRTTKIYATMAKQHGGYENIGCLEKDVRNHLDKDRLLSLELGDATAMLECFMLMQEENPRFFYAIDLDDENRLKNVFWVDAKGRDDYQEFGDVISFDTTYITNKYKMPFAPFIGVNNHFQSRLLGCALLVDET 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi173g00022 256 PANTHER OS01G0519700 PROTEIN 1 256 - -
Vivi173g00022 256 Pfam MULE transposase domain 216 255 IPR018289 -
Vivi173g00022 256 Pfam FAR1 DNA-binding domain 11 96 IPR004330 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi173g00022 FAR1 9e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi173g00022 - - vvo:131625832 537.339