Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi172g00003 ATGGCAACAGCTGAACCACTCGTTGAAGGCTCCACGGCAGAGGAAGTGGCGGCGGTTCCAGTTCCGGCGCCGGAGGTAGGGTTAAAGCACAAACTAGAAAGAAGATGGACTTTCTGGTTCGATAACCAATCCAAACCTAAACAAGGCGCCGCCTGGGGAACCACTCTTCGCAAAGTTTACACCTTTGACACCGTCGAAGAATTCTGGTGTTTGCATGATCAGATATTCAAGCCCAGTAAATTGCCTGGTAATGCTGATTTTCACTTGTTCAAGGATGGGGTTGAACCGAAGTGGGAAGATCCAGAGTGTGCCAGTGGAGGGAAGTGGACTCTCACCAGCAAGGGGAAGGGAAATCTTGATACCATGTGGCTTGAAACTTTGATGGCTTTGATTGGGGAGCAGTTTGGAGATTCTGAGGATATTTGTGGTGTAGTTGCGAGTGTACGCCAGTGGCAGGATAAGCTTTCGTTGTGGACAAAAACGGCAGCAAATGAGTCTGTTCAGATGAGCATCGGAAGAAAGTGGAAGGAAATCATTGATGTTAGCGACAAGATGACATATAACTTTCATGAAGATGCTAAAACTCGAGGTGCAAAGGCTCGATACACCGTGTAA 615 0.4764 MATAEPLVEGSTAEEVAAVPVPAPEVGLKHKLERRWTFWFDNQSKPKQGAAWGTTLRKVYTFDTVEEFWCLHDQIFKPSKLPGNADFHLFKDGVEPKWEDPECASGGKWTLTSKGKGNLDTMWLETLMALIGEQFGDSEDICGVVASVRQWQDKLSLWTKTAANESVQMSIGRKWKEIIDVSDKMTYNFHEDAKTRGAKARYTV 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi172g00003 204 Gene3D RNA Cap, Translation Initiation Factor Eif4e 25 204 IPR023398 -
Vivi172g00003 204 FunFam Eukaryotic translation initiation factor 4E 22 204 - -
Vivi172g00003 204 SUPERFAMILY eIF4e-like 13 199 IPR023398 -
Vivi172g00003 204 ProSitePatterns Eukaryotic initiation factor 4E signature. 86 109 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Vivi172g00003 204 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 24 195 IPR001040 GO:0003723|GO:0003743|GO:0006413
Vivi172g00003 204 Pfam Eukaryotic initiation factor 4E 32 188 IPR001040 GO:0003723|GO:0003743|GO:0006413
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi172g00003 17 204 Eukaryotic Initiation Factors Gene Family AT5G35620 63.731 6.44e-83 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi172g00003 K03259 - gmx:100499799 332.028