Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1705g00002 ATGGCTGTGGTAACAACTCCTGTGCCAGCAACAATACAAAGAACAGGTTCTATGAGTTCGGTTCGCGAAGTCGGGGGAGAGATTGAAGAGGAACCTAATACAGCTGTGGTTGATGAAGCAATCTATGTTGCTGTGTCAAAGGATGTAAAAGAGAGTAAGGTGAATCTGATATGGGCCATTCAGAACTCTGGTGGAAAGAGGATCTGTATCCTCTTTGTTCATGTGCCTGCAACAATGATCCCCTTGATGGGTGCTAAGTTTCCTGCAAGTTCACTGAAAGAGCAAGAAGTGCGAGCATACAGGGAAATTGAAAGGCAAAACATGCACAAGACTCTTGATGAATATCTTCGAATCTGTTATCGGATGGGGGTGCGAGCTGAAAAACTGCATATTGAAATGGATAACATTGAAAGAGGAATTATAGAACTCATCTCCCAAAATGGAATCCGAAAGCTTATTATGGGAGCAGCATCTGATAGGAATTATTCTAGGAGACTGATGGACCTCAAATCTAAGAAAGCCATATATGTATGTGAACAAGCTCCAGCTTCTTGCCATATTCAGTTTATCTGCAAAGGTCACCTTATACACACAAGGGATCGCAGTTTAAATGAACGAAGCTTAGAGGTTGCATCTCCTTTGGTACAGCAAGTGCCAAACTCCGTGAGATCTTTGAGATCTCAATCAATTACACTAGGGCAAATTCCTACGACAGATTCCTTTGGTTCTATTCAAGAGTTATTTCGCAGAGTTAGGTCTGCCAATGATGGACAGAGAGGGAGCATTACGACTGATTCTTCTCCAATTAACACCATAGGGTTTTCAACTCCATCTAATAGGCGAGGCACAGACGGAAGTTCTGATGAGTCCGATAGGTTGTCAAGGATGAGTCCTTCAGGTTTGTCGACATGCTCTGATAGTGCCGTTGAACCAACACTGACCCCAATTTCGGTTCCCGAGAGCAGTGAGAATACATTAGATTTGACTTTTAGTAGCCTGGTTATAAAGGAGGATCATCATCGTTTATCGCCACCAAGTGTACTGGATGGTGGAGTAAACGATACGGTATATGACCAACTTGAACAGGCTATGTCTGAGGCTAACAATGCTACTCGACATGCATATCAAGAAACTTTTAGGCGCGGAAAAGCTGAAAAAGATGCCATTGAAGCTATACGCAGGGCTAAAACATCTGAAAGCTTATATACAGAGGAGTTGAATCTGAGAAAAATGGCGGAGGAAGAATTAAAAAGGGAAAAAGAAGAACTTGAGAAAATGACGAGCCAGAGAGACAAAGTTAAGGAAGAACTTCAACTTGCTGTGGATTTGAAGTCATCGCTAGAGAGTCAACTTGCGTCATCTGAAGTTATGATACAGGAGTTGGAGAAGAAGATTATATCTGCTGTGGAGCTGTTACAAAGCTACAGGAATGAACGAGATGAATTGCAGATACAGCGCGATAATGCATTGAGAGAGGCTGAAGGTCTTAGGAAAAAACAAGGAGAGGGCTCGAGCACTCATGCATCTCAATTGTTCTCGGAATTCTCCTTTTCAGAAATCGAAGAAGCAACGAGTAACTATGATCCATCCCTAAAGATCGGAGAAGGTGGATATGGAAATATATATAAAGGCGTCCTCCGTCACACCGAAGTCGCTATAAAAATTTTGCACGCCAATAGCATGCAAGGACCCTTGGAGTTTCAGCAGGAGGTGGATGTATTGAGTAAGCTAAGGCACCCCAATCTGATCACTCTTATAGGAGCGTGCCCGGAATCCTGGTCTCTCGTCTACGAGTATTTACCAAACGGAAGTCTTGAAGACCGTCTTGCATGCAAGGATAACTCACATCCATTATCATGGCAAACACGGATTCGCCTTGCTGCAGAGCTCTGCTCCGCTCTCATCTTTCTTCATTCGAGTAAACCCCATAGCATAGTGCATGGTGACTTGAAACCCTCCAATATCATCCTGGATGCAAACCTTGTCAGTAAGCTTAGTGACTTTGGAATCTGTCGCATATTATCAAATCTCGAGAATTCTAGTAATAACAATACGCTGTTTTGGAAAACCGATCCAAAGGGAACTTTTGTATACATGGATCCTGAATTCCTTGCTTCTGGCGAACTCACTCCAAAATCCGATGTTTATTCATTCGGAATCATATTATTGAGATTGTTGACTGGAAGACCAGCCTTAGGAATAACTAAGGAAGTGAAATATGCTCTCGATACAGGAAAGTTAACATCTTTATTGGATCCTTTGGCCGGAGATTGGCCATTTGTGCAGGCCGAGCAGTTGGCTCGGTTGGCTTTGCGGTGCTGTGAGATGAGTCGGAAGAACCGGCCGGAGCTTCATTCAGATGTATGGAGGATACTTGATTCAATGAGAGCTTCTTCTGGAGGTACAAACTCCTTTGGTCTAAGCTCTGAAGGACCTCACCAACCTCCTTCATATTTTATCTGTCCAATCTTCCAGGAAGTAATGCGAGATCCACACGTAGCTGCAGATGGTTTTACCTACGAAGCCGAGGCTATCCGAGGATGGCTCGACAGTGGTCACGACACTTCACCGATGACAAACAGCACCCTTGGACATCAGAGTCTTGTCCCCAACCGCGCTCTTCGCTCTGCGATCCAGGATTGGCTTCAAAGTCACTGA 2658 0.4394 MAVVTTPVPATIQRTGSMSSVREVGGEIEEEPNTAVVDEAIYVAVSKDVKESKVNLIWAIQNSGGKRICILFVHVPATMIPLMGAKFPASSLKEQEVRAYREIERQNMHKTLDEYLRICYRMGVRAEKLHIEMDNIERGIIELISQNGIRKLIMGAASDRNYSRRLMDLKSKKAIYVCEQAPASCHIQFICKGHLIHTRDRSLNERSLEVASPLVQQVPNSVRSLRSQSITLGQIPTTDSFGSIQELFRRVRSANDGQRGSITTDSSPINTIGFSTPSNRRGTDGSSDESDRLSRMSPSGLSTCSDSAVEPTLTPISVPESSENTLDLTFSSLVIKEDHHRLSPPSVLDGGVNDTVYDQLEQAMSEANNATRHAYQETFRRGKAEKDAIEAIRRAKTSESLYTEELNLRKMAEEELKREKEELEKMTSQRDKVKEELQLAVDLKSSLESQLASSEVMIQELEKKIISAVELLQSYRNERDELQIQRDNALREAEGLRKKQGEGSSTHASQLFSEFSFSEIEEATSNYDPSLKIGEGGYGNIYKGVLRHTEVAIKILHANSMQGPLEFQQEVDVLSKLRHPNLITLIGACPESWSLVYEYLPNGSLEDRLACKDNSHPLSWQTRIRLAAELCSALIFLHSSKPHSIVHGDLKPSNIILDANLVSKLSDFGICRILSNLENSSNNNTLFWKTDPKGTFVYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVKYALDTGKLTSLLDPLAGDWPFVQAEQLARLALRCCEMSRKNRPELHSDVWRILDSMRASSGGTNSFGLSSEGPHQPPSYFICPIFQEVMRDPHVAADGFTYEAEAIRGWLDSGHDTSPMTNSTLGHQSLVPNRALRSAIQDWLQSH 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1705g00002 885 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 52 167 - -
Vivi1705g00002 885 Gene3D Transferase(Phosphotransferase) domain 1 600 804 - -
Vivi1705g00002 885 SMART Ubox_2 818 881 IPR003613 GO:0004842|GO:0016567
Vivi1705g00002 885 ProSitePatterns Serine/Threonine protein kinases active-site signature. 645 657 IPR008271 GO:0004672|GO:0006468
Vivi1705g00002 885 Gene3D Phosphorylase Kinase; domain 1 497 599 - -
Vivi1705g00002 885 SMART serkin_6 527 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1705g00002 885 Pfam U-box domain 816 885 IPR003613 GO:0004842|GO:0016567
Vivi1705g00002 885 Pfam Protein kinase domain 531 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1705g00002 885 CDD STK_N 41 193 - -
Vivi1705g00002 885 CDD RING-Ubox_WDSUB1-like 816 871 - -
Vivi1705g00002 885 SUPERFAMILY Protein kinase-like (PK-like) 503 785 IPR011009 -
Vivi1705g00002 885 FunFam receptor-like protein kinase FERONIA 491 599 - -
Vivi1705g00002 885 PANTHER OS02G0152300 PROTEIN 41 880 - -
Vivi1705g00002 885 MobiDBLite consensus disorder prediction 292 320 - -
Vivi1705g00002 885 Coils Coil 357 377 - -
Vivi1705g00002 885 ProSitePatterns Protein kinases ATP-binding region signature. 533 554 IPR017441 GO:0005524
Vivi1705g00002 885 ProSiteProfiles Protein kinase domain profile. 527 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1705g00002 885 Coils Coil 882 885 - -
Vivi1705g00002 885 ProSiteProfiles U-box domain profile. 814 885 IPR003613 GO:0004842|GO:0016567
Vivi1705g00002 885 Coils Coil 402 499 - -
Vivi1705g00002 885 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 813 885 IPR013083 -
Vivi1705g00002 885 SUPERFAMILY RING/U-box 809 884 - -
Vivi1705g00002 885 MobiDBLite consensus disorder prediction 252 320 - -
Vivi1705g00002 885 MobiDBLite consensus disorder prediction 256 283 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1705g00002 1 885 U-box Gene Family AT2G45910 55.257 0.0 941
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Vivi1705g00002 Pkinase 2.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1705g00002 - - gmx:100807515 1364.36