Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1704g00001 ATGGTTCTAATTGAGACAGCATCAGAATTGGAGGAGTTGAACCAGCGATACAAGTCTGAGAAAGTATCTGTGTGGTGGGTTTTAGAAAACTGGGATGAGTACAAGGATGTTGATCCTTGTCGTATAAAAGAAAACATCAGTATAGCACTTGCTAAGGAGGAGTACAAGGGTTCCGTTTCCATCTCTTGCTACGTTGACGAAGTTAACGCAACTAAAATTCCCGAACATGTGCTGACGGATCTCTCGTCCTCCGGAATTTCCATCAACCATTATCCTAAAGATGAGAAGCCTGTGATGCTCATTGTGGACATGTTGCGTTGGGCAGAATCCAACCCTCCACCTGCAAATTACTTATTTATATTCAATGATGATGATGATTATGATGGCGGATTTACTTATGCAATCGATTATCTCCTATGTTGCAAGTATAATATTCTTCTTGCATCCCCAGAGGCATGTGCACCATCCCTCGTTTCACTTTCCAAGAGAGTATGGCTTGTGCGTAGTCTATTTTCAGGAGAATCTCCGGCATCTGAGGAACAAGTTATGAAACTTCGTGGCTCCGATTCTGATGAAGAGGGTTCCCATTCTGATGGGTGA 600 0.4283 MVLIETASELEELNQRYKSEKVSVWWVLENWDEYKDVDPCRIKENISIALAKEEYKGSVSISCYVDEVNATKIPEHVLTDLSSSGISINHYPKDEKPVMLIVDMLRWAESNPPPANYLFIFNDDDDYDGGFTYAIDYLLCCKYNILLASPEACAPSLVSLSKRVWLVRSLFSGESPASEEQVMKLRGSDSDEEGSHSDG 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1704g00001 199 PANTHER LIMKAIN B LKAP 15 178 IPR024768 GO:0005777|GO:0010468
Vivi1704g00001 199 MobiDBLite consensus disorder prediction 179 199 - -
Vivi1704g00001 199 Pfam NYN domain 21 159 IPR021139 GO:0004540
Vivi1704g00001 199 CDD PIN_limkain_b1_N_like 21 150 - -
Vivi1704g00001 199 MobiDBLite consensus disorder prediction 184 199 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1704g00001 17 176 C2H2 Transcription Factor Family AT5G61190 41.718 5.62e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1704g00001 - - vvo:131642628 382.104