Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi16g00033 ATGAGTTTCAAAAGCAATAATTTCCTATCTCTTTTGGTTCCTATTGCTGCAATTTTTGCATCTTTGTATCTCATCAATCCAAATCCACAGTTTTTCACAACTTTGTCACCATCATCTATTTACTTTGGAAGAGACCATCATCACCATCATCATAGGCCACACAGAAAACACCCTGACACTGAGAATAATGATTCCGTTTGTGATGATTTTCCACCAGGAATTCCACCTCCAAACACCAATACGACTTCTTATCTTTGCGTCGATCGGAAAGGGTGTTGTAATTTCACAACTGTACAACAAGCTGTTAATGCTGTTCCTGATTTCAGCTTCAAAAGAACTATAATATGGATAAACAGTGGCTTCTACTATGAGAAAGTCATGGTTCCGAAAACAAAACCAAACATTACATTTCAAGGACAAAGCTACACTTCAACTGCAATTGCATGGAATGATACAGCAAAATCTGCTAATGGCACATTTTATAGTGGTTCCGTACAAGTTTTTGCATCTAACTTCATTGCTAAGAACATAAGCTTCATGAATTTAGCACCAATACCAGCTCCTGGGGCTGATGGAGCACAGGCAGTAGCCATGAGGATATCAGGAGACCAAGCTGAATTCAGAGGCTGTGGATTCTTTGGAGCTCAAGACACCCTTCACGACGATAAGGGTCGTCATTACTTCAAAGACTGCTATATACAAGGATCCATTGATTTCATCTTTGGCAATGCAAGGTCACTCTATGAGAATTGTCAACTAGTTTCTATAGCAAATCCAGTACCTCCAGGACAAAAGAACATAAACGGAGCAGTTACTGCTCATGGTAGAGTTTCAGGAGATGAAAACACAGGATATGTATTTGTGAACAGTACAATAGGAGGAAATGGTAGAATATGGTTAGGTAGGGCATGGAGACCATATTCTCGTGTCATTTTTGCATTCACAGTTATGTCTGATATCATTGCACCTGAAGGTTGGAATGACTTCAATGACCCTACAAGAGACCAGACTATATTTTATGGAGAGTACAATTGCTCTGGGCCAGGAGCTATTTTGAATACCAGGGCCCCTTATGTACAGAGATTGAATGATACACAAGCTTTTCCATTCCTTAATACAAGTTTTATTGATGGTGATCTATGGTTGGAAACTTAG 1155 0.3939 MSFKSNNFLSLLVPIAAIFASLYLINPNPQFFTTLSPSSIYFGRDHHHHHHRPHRKHPDTENNDSVCDDFPPGIPPPNTNTTSYLCVDRKGCCNFTTVQQAVNAVPDFSFKRTIIWINSGFYYEKVMVPKTKPNITFQGQSYTSTAIAWNDTAKSANGTFYSGSVQVFASNFIAKNISFMNLAPIPAPGADGAQAVAMRISGDQAEFRGCGFFGAQDTLHDDKGRHYFKDCYIQGSIDFIFGNARSLYENCQLVSIANPVPPGQKNINGAVTAHGRVSGDENTGYVFVNSTIGGNGRIWLGRAWRPYSRVIFAFTVMSDIIAPEGWNDFNDPTRDQTIFYGEYNCSGPGAILNTRAPYVQRLNDTQAFPFLNTSFIDGDLWLET 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi16g00033 384 ProSitePatterns Pectinesterase signature 2. 233 242 IPR033131 -
Vivi16g00033 384 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 73 383 - -
Vivi16g00033 384 MobiDBLite consensus disorder prediction 46 72 - -
Vivi16g00033 384 FunFam Pectinesterase 79 384 - -
Vivi16g00033 384 Gene3D - 78 384 IPR012334 -
Vivi16g00033 384 Pfam Pectinesterase 87 379 IPR000070 GO:0030599|GO:0042545
Vivi16g00033 384 SUPERFAMILY Pectin lyase-like 84 382 IPR011050 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi16g00033 56 383 Carbohydrate Esterase AT1G05310 71.646 0.0 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi16g00033 - - gmx:100806629 658.677