Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi16g00026 ATGCTCGACATAACAAAACTCAGATTAACATTCAAATTTTTCAATCTTAAACCCTCCCTAAACCCTAGATTTCACAGCACAGCAAAAACCTCACTTCAAATTCAATTACACCCAAAACCCAAACTTCCCTCAAAATCCACCATCAAAGAAGCCCAAGCCGCATTACTAGACTATCTTCACTCCACAAGAAGCTTGCAGTTTCTAGACGCGGACAACATGTGCAAAAACTCGCCTTTTTTCATTCAAACCCTCGTCGAAAAAACCCTAAAAAACGAGAAGCTTGTAAACCCTAAGCGCTTGATTTCTCGGTATTTACGTTACCATCCAATCAACGAATTCGAACCGTTTTTCGAGAGTTTGGGTTTGAAGCCTTCGGAATATATACCTCTTCTTCCTCGTGACTTGATTTTCCTTAATGATGATCCTGTTATGATGGAGAATTATCATACTCTGTGTAACTATGGGGTTCCGAGGTCTAAAATGGGGAAGATTTTCAAGCAGGCACCGGAGGTTTTTAGATTTGAAAATGGGGTTTTGGGTTTGAAGATTAAGGCTTATGAGAAGATGGGTGTTTCGTCTTCGGTTTTAGTGAATGCTGTTGCTGTAAGTCCTGGGATTTTGGTTGGTGATGTTAATGTTGATTTTGTGGAGGTTGTGGATATGTTGAAGGATATTGTTGCTGATGGTGGTGATGTTGATAGTGGTTGGATTAAGTGGGATTTTTTGGATGAGGTTTATTGTAATTGGGGCTTGATGCGTGAGCTCTTGTGCTTGCTTTCGGATGCTGGTTTGAGGAAGGAAGAGTTGGCGGAGATTATTCATCGTAGTCCTTGTGTTGTTTTTGAGGAATCGGGAGGTAGGACGCTCTCTATGATTGGTTTTTTGACTAAATTTGGATTGTCCGTGAACCAGATTGCCCCTGTGTTTCTTGAGTTTCCGCAGATTCGGATGGTCAAGTTTTTAGCCAACTTGAGAGTGTGTTTTCAGCTTCTGACTGAGATTGAGATGGAAGCTGCAGAGATTGGAAAGATTTTCCAGTCTCACACGTTATTTATTGGTTCATATACTCTTAAGACGACAAAGAGTTTGCTCGGTTGCTTGAATGTTGGCAAGAAGCGTCTCTGTGCCATAGTGCAGGAAAATCCTCATGAAATGAAGAAGTGGATTCTGGGGAGGAGAGTTAAGCCTTTGGTTAGCTTAAGGGAGGAGGAAGAGGAAAGATCGAGGGCGGGGAAGACAGAGTTCTTGCTGCGTTTAGGTTATGTGGAAAACTCAAAACAAATGAATACGGCATTTAAGGTGTTCAGGGGTAAGGGAGCTGAACTTCAGGAGAGATTTGATTTTATTGTTAATGCTGGCTTGACACGTGACGAAGTTTGTAGAATGATTAGAGTTTCCCCGCAGATTCTTAATCAGACCACAGACAGGGTCAAGATGAAAATTGAGTATCTTCAAAAAACAGGATATTCTGTATCAGATTTAGTGAGTTTTCCATCTTATCTTTCATACAAATCTCTAAGAGTTAAACATAGGTTGTCAATGTATAACTGGCTCATAGACAATGGAGCCGTAGAGCCCGGGCTTGCTTTGAGCACCATAATTGCATGCACAGATAGAATATTCTTACAAAGTTATGTAAATCGCCATCCCTTCGGCCTTCAAGTTTGGGAAGATTTGCAGAAAGAAATTCATTCTGAAGATTAA 1704 0.409 MLDITKLRLTFKFFNLKPSLNPRFHSTAKTSLQIQLHPKPKLPSKSTIKEAQAALLDYLHSTRSLQFLDADNMCKNSPFFIQTLVEKTLKNEKLVNPKRLISRYLRYHPINEFEPFFESLGLKPSEYIPLLPRDLIFLNDDPVMMENYHTLCNYGVPRSKMGKIFKQAPEVFRFENGVLGLKIKAYEKMGVSSSVLVNAVAVSPGILVGDVNVDFVEVVDMLKDIVADGGDVDSGWIKWDFLDEVYCNWGLMRELLCLLSDAGLRKEELAEIIHRSPCVVFEESGGRTLSMIGFLTKFGLSVNQIAPVFLEFPQIRMVKFLANLRVCFQLLTEIEMEAAEIGKIFQSHTLFIGSYTLKTTKSLLGCLNVGKKRLCAIVQENPHEMKKWILGRRVKPLVSLREEEEERSRAGKTEFLLRLGYVENSKQMNTAFKVFRGKGAELQERFDFIVNAGLTRDEVCRMIRVSPQILNQTTDRVKMKIEYLQKTGYSVSDLVSFPSYLSYKSLRVKHRLSMYNWLIDNGAVEPGLALSTIIACTDRIFLQSYVNRHPFGLQVWEDLQKEIHSED 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi16g00026 567 PANTHER CGI-12 PROTEIN-RELATED 256 549 IPR003690 GO:0003690|GO:0006355
Vivi16g00026 567 SMART mt_12 162 192 IPR003690 GO:0003690|GO:0006355
Vivi16g00026 567 SMART mt_12 460 490 IPR003690 GO:0003690|GO:0006355
Vivi16g00026 567 SMART mt_12 491 524 IPR003690 GO:0003690|GO:0006355
Vivi16g00026 567 SMART mt_12 270 301 IPR003690 GO:0003690|GO:0006355
Vivi16g00026 567 FunFam Transcription termination factor MTEF18, mitochondrial 291 559 - -
Vivi16g00026 567 Gene3D Transcription termination factor 3, mitochondrial 287 561 IPR038538 -
Vivi16g00026 567 Gene3D Transcription termination factor 3, mitochondrial 75 230 IPR038538 -
Vivi16g00026 567 Pfam mTERF 257 398 IPR003690 GO:0003690|GO:0006355
Vivi16g00026 567 Pfam mTERF 440 541 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vivi16g00026 mTERF 1.2e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi16g00026 - - tpra:123891547 785.793