Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi16g00016 ATGAAACGCGAATTGAATATCAGTGATAACAGCAATGACGATGATTATCAAACTAGTAACGGCCGTCGAGCTCTCCGCTCGAAGTACCTCGCCGTCAAGAACATGATTCACGGTGATGAAATGGAGAATATTGCGAAGACTGACTCTGAAGTATTTGGTTCGATCTTCAATGAAATTGAGAACTTACACCAGTCAGTCACAACAACAAGAGAACAAGTAGCTGATGCACATGCTCTTTTGGACATAACCAAATCCTTGGTAGTATCTGCAAAAGGTCATTCTAGAGATGGACTCACTCCTTCAGCCTTTGTCACCAGCCTTATTGAAAAATTTGGAAAACGAGGTGGAACAAGTGCTAGTAGAAAAGATTGCAACTCATTAGCTTGGAAGGACATTGGAGTTGCAGTTTCAAGTGTTTTTGGAGGGGGATATGGGTGTTATACAATGATCGGCCCAATGGATACAAAATTAAAACAGAAGACGGTTAATAGAAAAAAGCGTTTGAAGCCTACCGAATTGGCACGGCCAGAAGAGCTTGATGAAGGTTCAAGAAAACAGAGAAATGAAACTGATAAAACTATGTTAACTATGTTTAACATCTTAAGGAAGAATAGATCTGTCAAGCTTGAAAATTTGGTTTTGAATAAGAACTCTTTTGCGCAAACGGTAGAGAACTTATTTGCTCTATCTTTTTTAGTCAAAGATGGGCGAGCTGAAATCAAAGTGGACAAGGCTGGACGACATCTAGTTTCGCCAAGGAATGCTCCCGCCGCAAAATCAGTAATTTCTAAGGATGTTGCTTTGAGCCACTTTGTGTTCCGACTTGACTATATTGATTGGAAGTTGATGGTTCGCTCTGTTGTTGGGGAGGAGTTGATGCCGCATAGGAATATTCAAACACAAACTTAG 909 0.4048 MKRELNISDNSNDDDYQTSNGRRALRSKYLAVKNMIHGDEMENIAKTDSEVFGSIFNEIENLHQSVTTTREQVADAHALLDITKSLVVSAKGHSRDGLTPSAFVTSLIEKFGKRGGTSASRKDCNSLAWKDIGVAVSSVFGGGYGCYTMIGPMDTKLKQKTVNRKKRLKPTELARPEELDEGSRKQRNETDKTMLTMFNILRKNRSVKLENLVLNKNSFAQTVENLFALSFLVKDGRAEIKVDKAGRHLVSPRNAPAAKSVISKDVALSHFVFRLDYIDWKLMVRSVVGEELMPHRNIQTQT 302
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vivi16g00016 302 Pfam Nse4 C-terminal 207 287 IPR014854 -
Vivi16g00016 302 MobiDBLite consensus disorder prediction 1 20 - -
Vivi16g00016 302 MobiDBLite consensus disorder prediction 166 188 - -
Vivi16g00016 302 PANTHER UNCHARACTERIZED 8 297 IPR027786 GO:0005634|GO:0006281|GO:0030915
Vivi16g00016 302 MobiDBLite consensus disorder prediction 162 188 - -
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi16g00016 22 296 Non-SMC Element family AT1G51130 54.676 8.98e-98 292
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi16g00016 K22825 - gmx:100781485 380.178