Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi16g00004 ATGAGTCTGTTTCTAAAATATACACTTTTTGGGATCCCGATCCCTTACAAGATTTATCGCGTTACCAGTGAAACGTTTAATAATGACCCTTTCGCGAGATCGATGAGACTGGATAGGCATTACTGTGGCGAATTTTCCATGGCTGCAGTTCAGTCAAATAAGGATATGGAAGATCACAGCCATGTTGATGTTGGCCATGATGCACTCTTCGTTGGAATTTATGATGGCTTTAAAGGGCGTATTACGGAGAATGATAACAATATGACTGTGACTATTTTGAGGGAAGTTGTTGAGGAAATCGAAAACAGGTTTATGGAGTTTGCTAGAAGTAGTTTTGAGCATCAACATCAGCAACAGATAGGTTTAGTTAGTTCAGGTTGTTTGATTTGTTTTATATGGCGAGGGACATTATATGTTGCCAATGTTGGAGACTCGCGTGCTGTACTTGGTTCTCGGAAAGGTGTCGGTCCTTTTAAGAGATTGTGTGTGAAGCAAATGGTCAGAGTTCACAGTTGTGAAAATTCGGATATTAAAAAAGAACTACGTACATGGCATCCAGATGATAATCTTATTTACGAACTAAATGAATTACGCGATGAGGCGCATTCTCATATTTGCAAAGGTCAAATATGGACTATGAAAGGCTTAATCCAAACAAGCAGATGTATAGGATATGCATACATGAAGAAGGTGCCGTTTACTCAAAGGAGAACGTTCAAAATCCCAATGGGAGAACAAGTTGTTTCAGCTTTTACAAGACCTTGGCTAACATCAGAACCAGAAGTTTATTCAAGAGTCTTAAAAGACACTGATCGTTTCGTTATATTTGGATCTAGCGGATTTTGGAAATTGATGTCAAATGAGCTTGCTGCTAGAATTGTTAACACCAATCCACGAGATAATGTTGCTAAAATACTTGTCATGGTTGCTATAGAGAAGGGTGCTAATAAAAAAGGGAAAAAATACAGTGACGTTATAGAGATTCCGAAGGGAAGTGGTGTTAGTGGAGATTTTGGTTGTGCACATGAGAGAATTAGACCGTTTTATCATGACGATATCACTGTGATTGTTGTATTTTTGGACAAAAGGCCAATTGGTGTGAGGCCGGAGATCAAGTCTTACACTTGCAATGATTATGCAGATCTACCGTCAGAGTTTACACATTTCTATCATAATAAGAATGTGTGA 1188 0.3855 MSLFLKYTLFGIPIPYKIYRVTSETFNNDPFARSMRLDRHYCGEFSMAAVQSNKDMEDHSHVDVGHDALFVGIYDGFKGRITENDNNMTVTILREVVEEIENRFMEFARSSFEHQHQQQIGLVSSGCLICFIWRGTLYVANVGDSRAVLGSRKGVGPFKRLCVKQMVRVHSCENSDIKKELRTWHPDDNLIYELNELRDEAHSHICKGQIWTMKGLIQTSRCIGYAYMKKVPFTQRRTFKIPMGEQVVSAFTRPWLTSEPEVYSRVLKDTDRFVIFGSSGFWKLMSNELAARIVNTNPRDNVAKILVMVAIEKGANKKGKKYSDVIEIPKGSGVSGDFGCAHERIRPFYHDDITVIVVFLDKRPIGVRPEIKSYTCNDYADLPSEFTHFYHNKNV 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi16g00004 395 CDD PP2Cc 45 360 IPR001932 -
Vivi16g00004 395 PANTHER PROTEIN PHOSPHATASE 37 358 IPR015655 GO:0004722|GO:0006470
Vivi16g00004 395 Pfam Protein phosphatase 2C 65 317 IPR001932 -
Vivi16g00004 395 SUPERFAMILY PP2C-like 35 362 IPR036457 -
Vivi16g00004 395 ProSiteProfiles PPM-type phosphatase domain profile. 41 360 IPR001932 -
Vivi16g00004 395 SMART PP2C_4 38 358 IPR001932 -
Vivi16g00004 395 Gene3D - 22 365 IPR036457 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi16g00004 34 389 PP2C-type Phosphatase Gene Family AT5G06750 35.450 5.56e-68 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi16g00004 K01102 - psat:127131157 370.933