Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi168g00018 ATGGGGTGTTTCACTGTAAAGAAGAGCAAGAAGAAGAAGTCTGATCAGTTTGCTTATGTGAAACGCGTAAGCCGTAACAACCATGCACCTTCAGTGCTTCCTGAACCTCAAACTCTTACTCGATCACTTCAGTCTGCACCTCCTAGTTTTAGGACCAGAGTGAAACCCATTCAACATGTTAATAAAGTTGCTAACAATAGAGCACGGGCATTATCTGCTCCGTCAATTCTTGATGCAGCAGATCAAGATGATTTGGCCTCCATTGAGTATGAGGAACAAGAAGAGTCGAGATACCGAGGAGGAGTACGAGGAGGATCAATGAAGGAACAACGTTCTGCTAGTCCACAACCTTTACCTCTTCCATCTCCGCAGGGAGGTTGTACACTGAAAGCTAATAACAGCTTTAAGACGGGAACTGCTAGTGGTCCTCTAAATGCATCTGGACCTTTGCCGCTTCCACCTACTGGTTCACTTCGAAACTTTCCGTATGAGGAAGTTGCTGCTGCTTGCCAAAATTTCTCTCCTGATCGATGCATGTCTGAATGTCTTTCATCCACCATATACAAAGCTTACTTCGGTGACGATCCTTCAAATTCAAAGAAATTTGAAGCCACTGTCACACGTCTTCACCCATCATCTCAGGGCTTGAAGGAATTCATAAACGAGGTCAATACTCTCGCAACTTTGCAACATCCAAACCTATGTAAATTACTAGGTTTTCACGCGCGTGATAGTTCAGAACATAGAATGTTGGTCTATGAAAGGCTATACCATGGAAGCTTGGACCGCCTACTGTATGGTAGATCTGATGGACCATCAATTGATTGGAATACAAGAATGAAAATTGCAATGTGTGCTGCAAAGGGTCTTACTTTCTTGCATGAAGAAGGGCCTTTTCAGGCAATGTATAATGAATTTTCAACAGCCAACATACAGATTGACAAAGATTTCAGTGCTAAGCTTTCCGGGTATGGTTTTGTTGGACATATTCCTGAGGAAGAAATTCCAAGCAGCTCATCTGCTGTTGGAAACCTATCCATGGAGACACTGGAGAAAGGAATGCTCACACCAAAGAGCAATGTGTGGAGCTTTGGAATTTTTCTTCTGGAATTACTTACCGGAAGAAAGAATCTCGATGGCCACCACCCCAAGGAAGAGAGGAATTTAGTCAAATGGAGCAGACCTTTCTTAGCTGATAATTGTCGTTTATCATTGATCATGGACCCTCAACTCAAAGGCCGCTTTCCATCCAAAGCAGCAAGAACAATAGCCGACATTGCACAAAGATGCCTTCAAAAAGAGCCATCGGATCGACCCACTATGAGAACTGTTGTCGAGCATCTCAAAACGATACAGGATTTGAAGTACTCTTGCAGGTTCTCACTTCAAGAACCGGCACCATTATCTGGAAAAGAAATGTTCAGATCACCGAGTCTGAATGGTATCATATGCCCTGCACCTAGGTTGAGTTACTCTCCTTCGCGACCATCTATAGCCCCGCTAGCTGTTTCGCCTCCGAGATGGTCTGGCGTGCCTGTCCCTCTACCTAGAGCGTGTTCGACTCTCTCTCTGGAAGAGCTTGAAAGGCAAGAAAGCCGGAAGTCATCGTCGTCGGCCTCTAGGAGGGTTAGTGTTGAAGGATTTTTATTGTCTATATAA 1659 0.4436 MGCFTVKKSKKKKSDQFAYVKRVSRNNHAPSVLPEPQTLTRSLQSAPPSFRTRVKPIQHVNKVANNRARALSAPSILDAADQDDLASIEYEEQEESRYRGGVRGGSMKEQRSASPQPLPLPSPQGGCTLKANNSFKTGTASGPLNASGPLPLPPTGSLRNFPYEEVAAACQNFSPDRCMSECLSSTIYKAYFGDDPSNSKKFEATVTRLHPSSQGLKEFINEVNTLATLQHPNLCKLLGFHARDSSEHRMLVYERLYHGSLDRLLYGRSDGPSIDWNTRMKIAMCAAKGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGFVGHIPEEEIPSSSSAVGNLSMETLEKGMLTPKSNVWSFGIFLLELLTGRKNLDGHHPKEERNLVKWSRPFLADNCRLSLIMDPQLKGRFPSKAARTIADIAQRCLQKEPSDRPTMRTVVEHLKTIQDLKYSCRFSLQEPAPLSGKEMFRSPSLNGIICPAPRLSYSPSRPSIAPLAVSPPRWSGVPVPLPRACSTLSLEELERQESRKSSSSASRRVSVEGFLLSI 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi168g00018 552 Gene3D Phosphorylase Kinase; domain 1 154 254 - -
Vivi168g00018 552 Pfam Protein tyrosine and serine/threonine kinase 187 448 IPR001245 GO:0004672|GO:0006468
Vivi168g00018 552 PANTHER OS01G0588500 PROTEIN-RELATED 109 452 - -
Vivi168g00018 552 ProSiteProfiles Protein kinase domain profile. 173 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi168g00018 552 MobiDBLite consensus disorder prediction 30 51 - -
Vivi168g00018 552 MobiDBLite consensus disorder prediction 27 51 - -
Vivi168g00018 552 MobiDBLite consensus disorder prediction 90 153 - -
Vivi168g00018 552 Gene3D Transferase(Phosphotransferase) domain 1 256 462 - -
Vivi168g00018 552 MobiDBLite consensus disorder prediction 126 144 - -
Vivi168g00018 552 SUPERFAMILY Protein kinase-like (PK-like) 150 456 IPR011009 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi168g00018 152 452 Receptor kinase-like Gene Family AT4G02010 38.111 2.65e-55 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Vivi168g00018 PK_Tyr_Ser-Thr 2.3e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi168g00018 - - gmx:100809117 874.389