Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi168g00017 ATGTTAAACCTAAAGTCTCACAATCTCCCTAACCCAGCTCTTGCTACAGATTCAGAAACAAATGTGTGCATGGCATCACCAACTCAGATTACAAGACAATCACCTATAAAACGACGACGGAAGAGCATATCTCCACGTAATTTACCTAAGATTACTGATCAAGAATTACAGCAATTATCTGGAGATTTAAATTCCACCATTGTGCCGCTGTTTGAGAAGACATTGACAGCGAGTGATGTTGGTCGACTCGGTCGCATGGTTCTTCCGAAACCATGCGTTGAAGCATATTTTCCTCCGATTTCTGAACCGGGGGGCATTTATTTACATATTGAAGATGTGAAAGGGAAGAAACTGATGTTTAGATTTAGATTTTGGCCAAATAATAGCAGCAGGATATATGTTTTAGAAGGTGTACATCCTTGGATTCAGTCTATGCAATTGCAAGCTGGAGATTTCGTCACATTTAGCCGGATGGACCCCGGGGAGATACTAATAATTGGGTTTCGAAAGACATCAAATTTGTTTACGCAGGTGCATGAATTTACTTTGTCTAAAGGCATGAAAAGAGAGGGAATGCATCCGCCACAAGAGCTAGTTCCTGAGAAGAAACAAAGAACATGTGACATTGGTTCAAAAAGTAAGAGGCTGGTTATTGATAACCAAGATGCATTCATGTTGAAGCTTAGTTGGAAAGAGGCTCAAGGTTTTCTTCATCCATCACCAACAGTTAACTCGAACATTGTGGTGATTGAGGATCATGTTTTTGAAGAATATGAAGAACCTCCTATCATTTCAAAGAGAGGAATATTCATAAACGGGATGAATGAGAAATGGATACAGTGTGACAAGTGCTCAGAATGGAGGAAGTTGGGATCTGTGGAGAATTTATGGGAACAGAGAAGGTGCTCATGTTCTGTTCCTATGAGTTGA 930 0.4022 MLNLKSHNLPNPALATDSETNVCMASPTQITRQSPIKRRRKSISPRNLPKITDQELQQLSGDLNSTIVPLFEKTLTASDVGRLGRMVLPKPCVEAYFPPISEPGGIYLHIEDVKGKKLMFRFRFWPNNSSRIYVLEGVHPWIQSMQLQAGDFVTFSRMDPGEILIIGFRKTSNLFTQVHEFTLSKGMKREGMHPPQELVPEKKQRTCDIGSKSKRLVIDNQDAFMLKLSWKEAQGFLHPSPTVNSNIVVIEDHVFEEYEEPPIISKRGIFINGMNEKWIQCDKCSEWRKLGSVENLWEQRRCSCSVPMS 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi168g00017 309 CDD B3_DNA 69 170 IPR003340 GO:0003677
Vivi168g00017 309 MobiDBLite consensus disorder prediction 27 46 - -
Vivi168g00017 309 Gene3D - 49 174 IPR015300 -
Vivi168g00017 309 Pfam B3 DNA binding domain 71 168 IPR003340 GO:0003677
Vivi168g00017 309 SUPERFAMILY DNA-binding pseudobarrel domain 68 171 IPR015300 -
Vivi168g00017 309 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 13 307 - -
Vivi168g00017 309 ProSiteProfiles B3 DNA-binding domain profile. 71 171 IPR003340 GO:0003677
Vivi168g00017 309 SMART B3_2 71 172 IPR003340 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi168g00017 9 307 B3 DNA Binding Superfamily AT4G32010 45.455 2.08e-89 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Vivi168g00017 B3 9.4e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi168g00017 K09287 - psat:127130998 561.222