Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1676g00001 ATGTCTTTACAAAACAAGGGATTCTGGATGGTAAAAGGATCTGGACATGTTAGTGACAGAGAGCCGGTATTTGATAATCACTCCAAAACTGAACCAAAACGACCTCATCAATGGTTAATTGATGCAACTGAAGGGGATTATTTACCAAACAAGAAGCAAGCAATAGAAGATGCAAATGAAAGATCTAGTTCTGGATTTTCAAATGTAAATTTTACTCAGTGGGAGAACAATCATAATTTCAATTCAGTTCCAAACCAATTTATTGATCGGTTATTTGGATCTGAAACTAGGCCTGTCAATTTCTCTGAAAAGAATACTTATGTTTCAGCTGATGATTCTAATGTGAGGTCAAATTTGATCTCCAATCATTATGGAGATGATGCATCTTTTGGCTTGTCTATATCTCATTCTGCTGAAGATTCTGAACCATGTATGACTTTTGGGGGAATCAAGAAAGTCAAAGTGAATCAAGTTAAGGATTTCGACATTGTACAAGCTCCAGAGGGACATGACTATGATAGGCAGGGTAAGGGTGATCTACATCAAGCCTATAATGGGGAAATTGAGACGACATCTGGGTCAATAGGGCAAGCCTTTGACAAGGATGGCAATGTCGCTTTACTGGGACTCACCTATGGCAGAGGGGATGCCCATATAAGATCGTTTGGTACCCCCTTTGGCAAAGGAGATAACAACACAGTCCTATCAATTGGTGAATCCTGTAATAAAGAGGACAAAAATATAATTTCTTTTGGTGGCTTCCCAGATGAACGGGGCGCTATCTCTATGGGCAGGGCTACTACAGACTATGAACAATTATATAATCAATCATCAGTTCATGTGTCAACAACAGGCCATGAGAAAGAGTTGGATGCATCAAATTCCGGTGTAGTTGAAAGTACTCCTTCGGTAGCAACAATAAAGCCTGAATCTGTGACCAAGAATAAACAAGATATCAAAAGGAAAGAATCTCCAACCACCTTCCCAACTAATGTCAGGAGCTTGATATCTACTGGTATGCTTGATGGTGTTCCTGTGAAGTATGTCTCAGTGTCGCGGGAGGAACTTCGTGGGATTATAAAAGGCTCTACCTATCTTTGTGGGTGTCCGTCATGTAACTATTCTAAGGGTCTCAATGCTTATGAGTTTGAAAGGCATGCCGGTTGCAAAACAAAACATCCAAACAATCATATTTATTTCGAGAATGGGAAGACCATTTATCAAATAGTACAGGAATTGAGGAATTCTCCGGAGAGTTCATTGTTTGACACAATTCAAACTATTTTCGGTGCACCAATTAATCAGAAAGCATTTCGCATTTGGAAAGAATCATTTCAAGCAGCAACACGCGAGCTTCAGCGTATTTATGGAAATGAAAGACGCAACCTCTAA 1392 0.3958 MSLQNKGFWMVKGSGHVSDREPVFDNHSKTEPKRPHQWLIDATEGDYLPNKKQAIEDANERSSSGFSNVNFTQWENNHNFNSVPNQFIDRLFGSETRPVNFSEKNTYVSADDSNVRSNLISNHYGDDASFGLSISHSAEDSEPCMTFGGIKKVKVNQVKDFDIVQAPEGHDYDRQGKGDLHQAYNGEIETTSGSIGQAFDKDGNVALLGLTYGRGDAHIRSFGTPFGKGDNNTVLSIGESCNKEDKNIISFGGFPDERGAISMGRATTDYEQLYNQSSVHVSTTGHEKELDASNSGVVESTPSVATIKPESVTKNKQDIKRKESPTTFPTNVRSLISTGMLDGVPVKYVSVSREELRGIIKGSTYLCGCPSCNYSKGLNAYEFERHAGCKTKHPNNHIYFENGKTIYQIVQELRNSPESSLFDTIQTIFGAPINQKAFRIWKESFQAATRELQRIYGNERRNL 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1676g00001 463 PANTHER AUTOIMMUNE REGULATOR 9 160 - -
Vivi1676g00001 463 MobiDBLite consensus disorder prediction 282 302 - -
Vivi1676g00001 463 Pfam Tify domain binding domain 358 413 IPR032308 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1676g00001 309 446 PHD Transcription Factor Family AT3G53680 49.645 2.66e-38 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1676g00001 - - tpra:123918512 767.689