Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1662g00010 ATGGCACCAGAAGTTCTTCGTAATGAACCGTCAGATGAGAAGTCTGATGTATATAGCTTTGGGGTGATATTATGGGAACTTGCGACTGAAAAGATTCCTTGGGATACTCTCAACTCAATGCAGGTAATTGGAGCTGTAGGGTTCATGAATCAGCGTCCAGAAATTCCAAAAGATGTTGATCCCGAGTGGGCTTCTTTAATTGAAATCTGTTGGCACAGCGATCCAACTTGCCGACCAACTTTCCCCGAACTGCTTGAAAGGCTTAGAGAGTTGCAAAGACGGTATGTCATTGAGTTCCAAGCAGCCCGATCTGCTGGCGGTGAAAGCATCCAAAGAAAAGAGTCATAG 348 0.4511 MAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDTLNSMQVIGAVGFMNQRPEIPKDVDPEWASLIEICWHSDPTCRPTFPELLERLRELQRRYVIEFQAARSAGGESIQRKES 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1662g00010 115 Pfam Protein tyrosine and serine/threonine kinase 1 88 IPR001245 GO:0004672|GO:0006468
Vivi1662g00010 115 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 94 - -
Vivi1662g00010 115 Gene3D Transferase(Phosphotransferase) domain 1 1 114 - -
Vivi1662g00010 115 ProSiteProfiles Protein kinase domain profile. 1 96 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1662g00010 115 SUPERFAMILY Protein kinase-like (PK-like) 1 88 IPR011009 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1662g00010 1 105 MAP Kinase Kinase Kinase AT3G06640 78.095 1.87e-56 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Vivi1662g00010 PK_Tyr_Ser-Thr 1.7e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1662g00010 - - vvo:131642523 235.728