Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi165g00044 ATGGCGGCGAAGAACGACCAAGTTACAGACACCAAAAAGAGAAAGCGAACCAACACCGAAACTCACAAATCCCCTTCTAAACCAAAGGAACTTGCGGATTTTAGAAAGAAGAAGAGAAGACGCCATTTTACTCTCGAACAAGATCTTGCTCGTCTATGGGAAAAGATGAGGCATCACGAGATTGCGAAAGCAGATAGATCTAAGTTGGTCACAGAAGCTTTAACGAAAAATGAAGGGGAAGATTCATTAGATTGCAGGGTCTTATATTACTCTCTCACTTTTGGCCTTCAAGTGCCTTTACACTTATCAAATGTATATCACAGAGACCTTAAGCCAAAGAATATACTGGCAAATGCAAATTGCAAACTCAAAGTTTATGATTTTGGACTTGCACGTGTTGCATTCAATGATACCCCAACAACAACTTTTTGGACGTACACACTTGCAATTGATATATGGAGCATTGGATGCATTTTTGCAGAAGTGCTGACAGGAAAACCATTGTTTCCTGGTAAAAGTATTGTGCATCAATTAGACTTGATCACTGATCTTCTTGGAACACCACCACCCGAAATTATTGCAGGAGTATAG 591 0.3993 MAAKNDQVTDTKKRKRTNTETHKSPSKPKELADFRKKKRRRHFTLEQDLARLWEKMRHHEIAKADRSKLVTEALTKNEGEDSLDCRVLYYSLTFGLQVPLHLSNVYHRDLKPKNILANANCKLKVYDFGLARVAFNDTPTTTFWTYTLAIDIWSIGCIFAEVLTGKPLFPGKSIVHQLDLITDLLGTPPPEIIAGV 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi165g00044 196 Gene3D Transferase(Phosphotransferase) domain 1 82 194 - -
Vivi165g00044 196 SUPERFAMILY Protein kinase-like (PK-like) 74 194 IPR011009 -
Vivi165g00044 196 ProSiteProfiles Protein kinase domain profile. 1 196 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi165g00044 196 Pfam Protein kinase domain 76 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi165g00044 196 MobiDBLite consensus disorder prediction 7 32 - -
Vivi165g00044 196 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 55 191 - -
Vivi165g00044 196 SMART serkin_6 7 194 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi165g00044 196 MobiDBLite consensus disorder prediction 1 35 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi165g00044 100 196 MAP Kinase Gene Family AT3G14720 73.504 8.37e-54 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Vivi165g00044 Pkinase 1.6e-18 CL0016