Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi165g00026 ATGGCTAATTCAGCGGAACCCTCGTCGTCGTTGAGTTTTACATCATCTTCGCACTTATCGAATGGATCAATTAGTCACAACTCGAATGGGAATGATCATGCTCGTAACCTGGAGGCTATCAGTTTGAGTAAGCTTAGTTCTAATTTGGAACAGCTTTTGATTGATTCTGATTATGATTATGGTGATGCGGATATTGTTGTTGAGGGAGTTTCGGTTAGAGTTCATCGGTGTATTTTAGGTTCTAGGAGTAAGTTTTTTCATGAGCTGTTTAAGAGAGGTAAAGAAAAAGGATTGGCAAAGAGTGAAGGGAAATTGAAGTATTGCTTGAGTGATCTGTTGCCTTATGGTAAAGTTGGACATGAAGCTTTTCTTATATTGCTTAGCTATGTATATACCGGTAAACTTATACCGTCTCCAATGGAGGTTTCTACATGTGTTGATAATGTGTGTGCTCATGATGCGTGTGGACCTGCAATTAACTTTGCTGTGGAGTTGATGTATGCCTCTTCTATTTTTCAAATGCCGGAGTTGGTTTCACTTTTTCAGCGACGTCTTCTTAACTTTGTAGGGAAGGCTCTTGTCGAAGATGTCATTTCAATCCTTATGGTTGCTTTCCATTGTCAATTGAATCAACTCGTCGCTCAATGTGTTGACAGGGTGGCACGATCAGACCTTGACCAGATCTCAATAGAGAAAGCGCTTCCTCATGAGCTCTCCGAAAAAGTTAAATTGTTCCGCCGTGATCTACAGAAGGACGGTGAAGACGATGCTCCCGTAGTGGACGCTTTGTCTCTAAAACGAATCACTAGAATACACAAGGCATTGGACTCGGACGACGTCGAGCTTGTTAAACTTCTTTTGAACGAGTCAGACATTTCTTTAGATGAAGCCGGTGCTCTCCATTATGCAGCAGCCTACTGTGACCCTAAGGTTGTCTCTGAAGTACTTGGATTAGGTCTAGCTAATGTCAATCTTCGGAATTCTCGAGGGTACACAGTGCTTCACGTTGCTGCCATGCGTAAGGAGCCTTCCATTATAGTATCACTTCTTACTAAAGGGGCCTGCGCGTCGGATTTGACTTTCGATGGTCAGAGTGCTGTTAGTATCTGTAGGAGGTTGACAAGACCGAAGGATTACCACACAAAAACAGAACAAGGAAAAGAAACAAACAAAGACCGGATATGCATCGATGTTCTTGAAAGAGAAATGCGAAGAAATCCTTTGGCTGGAGATCCCTCTGTGTCTTCCCAAACAGTGGCTGATGATCTCCACATGAAGCTTTTATACCTCGAGAACAGAGTGGCATTTGCGAGACTGTTCTTCCCTTTGGAAGCCAAACTAGCTATGGACATTGCTCGTGCGGAGACAACATCCGAGTTTGCTGGTCTTTCGGCGGCGAAAGGTTCAAGTGGAAACTTAAGGGAGGTCGACCTCAATGAGACTCCCATAATGCAAAACAAAAGACTTATTTCTAGGATGGAAGCCCTAATGAAAACAGTGGAAATGGGGCGGCGCTACTTTCCTCATTGCTCTGAAGTGCTCGATAAATTCATGGAGGATGACCTACCTGACCTGTTTTACCTTGAGAAAGGAACTCAAGAAGAGCAGAGAATCAAGAGAACGCGATTCGTGGAGCTTAAAGACGATGTGAACAATGCTTTTAGCAAGGACAAGGCTGAGTTTAGTCGCTCTGGGATTTCATCTTCATCATCCTCATCATCTCTTAGAGATTCTGTATATTACAAGGCTAGGAAAATATGA 1761 0.4316 MANSAEPSSSLSFTSSSHLSNGSISHNSNGNDHARNLEAISLSKLSSNLEQLLIDSDYDYGDADIVVEGVSVRVHRCILGSRSKFFHELFKRGKEKGLAKSEGKLKYCLSDLLPYGKVGHEAFLILLSYVYTGKLIPSPMEVSTCVDNVCAHDACGPAINFAVELMYASSIFQMPELVSLFQRRLLNFVGKALVEDVISILMVAFHCQLNQLVAQCVDRVARSDLDQISIEKALPHELSEKVKLFRRDLQKDGEDDAPVVDALSLKRITRIHKALDSDDVELVKLLLNESDISLDEAGALHYAAAYCDPKVVSEVLGLGLANVNLRNSRGYTVLHVAAMRKEPSIIVSLLTKGACASDLTFDGQSAVSICRRLTRPKDYHTKTEQGKETNKDRICIDVLEREMRRNPLAGDPSVSSQTVADDLHMKLLYLENRVAFARLFFPLEAKLAMDIARAETTSEFAGLSAAKGSSGNLREVDLNETPIMQNKRLISRMEALMKTVEMGRRYFPHCSEVLDKFMEDDLPDLFYLEKGTQEEQRIKRTRFVELKDDVNNAFSKDKAEFSRSGISSSSSSSSLRDSVYYKARKI 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi165g00026 586 FunFam Regulatory protein NPR3 35 221 - -
Vivi165g00026 586 Pfam Domain of unknown function (DUF3420) 224 272 IPR024228 -
Vivi165g00026 586 CDD BTB_POZ_NPR_plant 44 189 - -
Vivi165g00026 586 FunFam regulatory protein NPR3-like 263 403 - -
Vivi165g00026 586 PANTHER REGULATORY PROTEIN NPR3 10 576 IPR044292 GO:0009862|GO:2000022|GO:2000031
Vivi165g00026 586 SUPERFAMILY Ankyrin repeat 261 372 IPR036770 -
Vivi165g00026 586 Gene3D - 263 403 IPR036770 -
Vivi165g00026 586 ProSiteProfiles Ankyrin repeat region circular profile. 329 354 - -
Vivi165g00026 586 Pfam NPR1/NIM1 like defence protein C terminal 371 573 IPR021094 -
Vivi165g00026 586 ProSiteProfiles BTB domain profile. 61 139 IPR000210 GO:0005515
Vivi165g00026 586 SUPERFAMILY POZ domain 49 187 IPR011333 -
Vivi165g00026 586 SMART BTB_4 61 189 IPR000210 GO:0005515
Vivi165g00026 586 ProSiteProfiles Ankyrin repeat profile. 329 354 IPR002110 GO:0005515
Vivi165g00026 586 Pfam Ankyrin repeat 330 355 IPR002110 GO:0005515
Vivi165g00026 586 SMART ANK_2a 266 294 IPR002110 GO:0005515
Vivi165g00026 586 SMART ANK_2a 295 325 IPR002110 GO:0005515
Vivi165g00026 586 SMART ANK_2a 329 361 IPR002110 GO:0005515
Vivi165g00026 586 Pfam BTB/POZ domain 59 179 IPR000210 GO:0005515
Vivi165g00026 586 Gene3D Potassium Channel Kv1.1; Chain A 26 221 IPR011333 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Vivi165g00026 NPR1_like_C 9.1e-96 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi165g00026 K14508 - gmx:100217338 941.799