Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi165g00011 ATGGATTTGTCTGGCCAGCTTTCATCAGAAATTGGATCACTCTCCGAATTGCAGATTTTGGTTCTGTCCTACAACAAGAATTTAACAGGACCGCTTCCGGCCGAAATTGGAAATTTGAAAAAGCTGAGAAACTTACAGCTTATTAACTGCGGCTTCAGCGGTCCTATCCCAGATACAATAGGAAATCTAAAACAGCTTGTATTCCTATCTTTGAATTCTAATAGATTTAGCGGAACAATTCCAGCTTCTATTGGTAATCTCTCAAGTATTAACTGGCTAGACTTAGCAGAAAACCAGCTCCAGGGTCCTATCCCAATATCTAGTGGAACTACTCCCGGTCTCGATATGTTGCACAAAACAAAACACTTTCATTTTGGGAAGAATAAGCTTTCAGGGACTATTCCAGCTAAACTTTTTAGTTCTGAAATGTCGTTGATACATGTGCTTTTTGAAAGCAACAAATTTACTGGCAGCATTCCATCTACACTTGGACTTGTGAAGACACTGGAAGTGGTGCGCTTGGATAACAATTCGTTAAATGGACCTGTGCCTCAAAACATCAACAATCTTACAAACGTTAGAGAATTGTTCCTGTCCTCTAATCACCTATCCGGTTCCCTGCCAAACCTTACTGGAATGAACGTCCTCAGTTACCTGGATATGAGCGATAACCAATTTGATCAATCAGACTTTCCATCATGGTTATCAACTCTTCAGTCTCTAACAACAATAATGATGGAGAAAACACAACTTCAAGGATCTATTCCCGTTTCTTTGTTCAGCCTGGGACAGTTACAGACAGTGATGCTGAAAAACAACCAGCTGAATGGAACTTTAGATATTGGCACAACCATTAGTGACCAACTGGGAGTCATTGATTTGCAGACTAATTTTATTGAAAAATTTGATCCACGGATCGATGTCTCTAAAGTGGAGATAACACTTGTAGAAAATCCTTATTGTGATGAAGGACTCCCAGCGGCGAAACAAACCTACTGCTCCATTGCAAAAAACAATGACTCATATACAACGCCGCTAAATAACTGTGTGCCAGTTTCCTGCGACTCGAATCAGATATTAAGCCCGAATTGCAAATGTACATACCCTTACACCGGAACTTTAACTCTTAGAGCTCCTTCTTTCTCTGACTTGGGAAACAAGACAGTGTTTGATATGCTAGGTTTCACTCTTATGGAGTCTTTTAGAAATCACGACAAACCCGTGGATTCAGTTTCCTTAAGCAATCCGAGGAAGAATGTGTATCAGTATCTTGATTTGAGTTTAGAAATATTTCCATCAGCCCAAGATTCTTTCAATAGAACCGGTATTTCTGGCATAGGCTTTATGCTCAGCAACCAAACATACAAGCCTCAAGCTGACATTTTTGGACCATTTTATTTCCTTGCTGATAAGTATGAACATTATCTGAATGACTCGGTAATAGAAGAAGGTCCTGTGAAATCCAGTAAATCGTCAAATATTGGCATCATCGCTGGAGCTGCTATTGGCGGTTGTGTCCTGGTTGTGTTATTACTCCTTGCAGTTGTTTACGGTTTCCGCCAAAAGAACAAGGCAAAAAGAGAAGCTAAGAAAAGCAGCCTTTTTGAACAATGGGGTCCTGATGAGAGCAATAGTAGCATCCCACAGTTGAAAGGTGCGAGGCGCTTCAGTTTCGAGGAGATTCAGAACTGCACCAAAAAGTTTTCACAACTCAATTACATAGGATCTGGGGGATATGGGAAGGTTTATAGGGGAACTCTTCTCAATGGACAACTAATTGCAGTAAAACGAGCTCAAAAGGAATCAATCCAAGGAGGGTTGGAATTCAAAACGGAGATTGAACTTCTATCGAGGGTCCACCATAAAAATCTTGTTAGCCTTATTGGTTTTTGCTTTGAGCAAGGCGAACAAATATTGGTTTATGAGTATGTTGTAAATGGTACTTTGACAGATGCTCTTTCAGGTAAGTCAGGAATTAGATTGGACTGGATTAGAAGGCTAAAAATAGCCCTTGGTGCTGCTCGGGGGTTGGATTATCTTCATGAACATGCTAATCCTCCTATCATACATAGAGACGTCAAATCGACAAACATTTTACTCGACGAGCGCTTGAATGCTAAAGTATCCGATTTCGGTCTATCCAAGCCATTGGGTGATGGTGCAAAAGGTTATATCACAACTCAAGTCAAAGGGACAATGGGTTACTTGGATCCAGAATATTACATGACACAGCAATTGACAGAGAAAAGTGATGTTTATAGCTTTGGAGTACTAATGTTGGAGTTGATAACAGCAAGAAGGCCAATAGAAAGAGGGAAATATATCGTGAAAGTTGTTAAGAATGCAATTGACAAGACAAAAGAGTTAAATGGTCTTACGGAAATCCTTGATCCTGTCATTGATTTTAAGGCATCGTTGAACAGTTTTGAAAAATTTATAGGTCTAACAATGAAATGTGTGGAAGAGTCAAGTTCAAATAGGCCTTCAATGAATTATGCACTGAAAGAAATCGAAAACATGTTGCTGTTGGCTGGCACTAACCCTAATGCTGAATCAGCATCTCCTTCATCTAGTTATAATGCTAGTGGAAATTCTATGCATCCTTATGAAAATGAGTACTTTGATTCAAGTGTGGTACTTCCACGCGCATAA 2652 0.3978 MDLSGQLSSEIGSLSELQILVLSYNKNLTGPLPAEIGNLKKLRNLQLINCGFSGPIPDTIGNLKQLVFLSLNSNRFSGTIPASIGNLSSINWLDLAENQLQGPIPISSGTTPGLDMLHKTKHFHFGKNKLSGTIPAKLFSSEMSLIHVLFESNKFTGSIPSTLGLVKTLEVVRLDNNSLNGPVPQNINNLTNVRELFLSSNHLSGSLPNLTGMNVLSYLDMSDNQFDQSDFPSWLSTLQSLTTIMMEKTQLQGSIPVSLFSLGQLQTVMLKNNQLNGTLDIGTTISDQLGVIDLQTNFIEKFDPRIDVSKVEITLVENPYCDEGLPAAKQTYCSIAKNNDSYTTPLNNCVPVSCDSNQILSPNCKCTYPYTGTLTLRAPSFSDLGNKTVFDMLGFTLMESFRNHDKPVDSVSLSNPRKNVYQYLDLSLEIFPSAQDSFNRTGISGIGFMLSNQTYKPQADIFGPFYFLADKYEHYLNDSVIEEGPVKSSKSSNIGIIAGAAIGGCVLVVLLLLAVVYGFRQKNKAKREAKKSSLFEQWGPDESNSSIPQLKGARRFSFEEIQNCTKKFSQLNYIGSGGYGKVYRGTLLNGQLIAVKRAQKESIQGGLEFKTEIELLSRVHHKNLVSLIGFCFEQGEQILVYEYVVNGTLTDALSGKSGIRLDWIRRLKIALGAARGLDYLHEHANPPIIHRDVKSTNILLDERLNAKVSDFGLSKPLGDGAKGYITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELITARRPIERGKYIVKVVKNAIDKTKELNGLTEILDPVIDFKASLNSFEKFIGLTMKCVEESSSNRPSMNYALKEIENMLLLAGTNPNAESASPSSSYNASGNSMHPYENEYFDSSVVLPRA 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi165g00011 883 ProSitePatterns Protein kinases ATP-binding region signature. 574 596 IPR017441 GO:0005524
Vivi165g00011 883 SUPERFAMILY Protein kinase-like (PK-like) 554 869 IPR011009 -
Vivi165g00011 883 Gene3D Ribonuclease Inhibitor 111 318 IPR032675 -
Vivi165g00011 883 Gene3D Transferase(Phosphotransferase) domain 1 644 852 - -
Vivi165g00011 883 PANTHER RECEPTOR-LIKE PROTEIN 55 25 840 - -
Vivi165g00011 883 SUPERFAMILY L domain-like 4 304 - -
Vivi165g00011 883 ProSiteProfiles Protein kinase domain profile. 568 842 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi165g00011 883 FunFam Leucine-rich repeat protein kinase family protein 110 209 - -
Vivi165g00011 883 Gene3D Phosphorylase Kinase; domain 1 540 643 - -
Vivi165g00011 883 CDD STKc_IRAK 574 840 - -
Vivi165g00011 883 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 644 853 - -
Vivi165g00011 883 FunFam Leucine-rich repeat protein kinase family protein 532 643 - -
Vivi165g00011 883 ProSitePatterns Serine/Threonine protein kinases active-site signature. 688 700 IPR008271 GO:0004672|GO:0006468
Vivi165g00011 883 Gene3D Ribonuclease Inhibitor 1 110 IPR032675 -
Vivi165g00011 883 SMART serkin_6 568 843 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi165g00011 883 Pfam Protein kinase domain 569 835 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi165g00011 1 883 Receptor kinase-like Gene Family AT5G49760 55.581 0.0 902
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Vivi165g00011 Pkinase 2.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi165g00011 - - gmx:100782366 1323.92