Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi165g00003 ATGAATGACAATATTGTGTGTTCTCCGAATGATAAGGGGTTGTTGCTAACTACTAATCTCGACATCACGATAGATGAGGGATCTTTGCACGGTGAGCAACTACTTGAAGTTGAGGGCAAAGAGCTCGAGAATGACTGTAGTCAATTGTTTGAGATTGATGGATGTGAACATGAGAATGGACGGGATGAAAATGAAACAGCAGTTGTTGACAGTAATAGTAGAGAATCTCAAGGAAAAGACTTCCAGCCACCTGTCGTAGGAATGGAGTTTGAAACTTATGATGATGCCTACAACTATTATAACAGCTATGCTAAAGAAATTGGATTTGCTATACGGGTTAAATCATCTTGGGCCAAACGTAACAGTAAAGAGAAGCGTGGTGCTGTCTTGTGCTGTAACTGTGAGGGTTTCAAAACAATTAAAGAAGCTAATAGTCATAGGAAAGAGACAAGAACAGGCTGTCTAGCAATGATTAGATTGAGATTAGTGGAGTCTAATAGGTGGAGGGTTGACGAAGCCAAGCTTGAGCATAACCATTCATTTGATCCTGAGAGAGCACAGAACTCTAAATCACATAAGAGGATGGACAGTGGGGCCAAAAGAAAATTTGAGCCAACTCTAGATGTTGAAGTGCGGACAATCAAGTTATATCGAATGCCAAATGTAGATGCTTCTGGTTATGGGAGCTCAAATTCTAATGAAGGAGGAACTAGCAACAATGTTAAATTTTCCAGGCGTTTGAAACTAAAAAAAGGTGATGCAGAACTTATTTCTAATTACTTCTGTCAGCGTCAACTGGAGAGTCCTAATTTTTTCTATGTGATGGATCTGAATGATGATGGACAACTGAGGAACATATTTTGGATTGATTCTAGATCTAGGTCAGCATATAGTTATTTTGGTGATGTGATTGCATTTGACACAACATATTTGTCAAACAATTATGAGATTCCACTTGTTGCATTTGTTGGTATTAATCACCATGGACAATCTATTTTGCTAGGATGTGGTCTGCTTGCAGATGAGACATTCGATACCTATATTTGGTTATTTAGGGCATGGATTACTTGTATGTCTGGTCGCCCTCCACAAACTATTGTTACAAACCAATGTAAGACCCTGCGAAGTGCAATAGCAGAGGTTTTCCCGAGGGCTCACCATAGAATTTGTCTATTGCAAGTCATGCAGAGTATCCGTGGATGTATGGTGCAGTTTCAGGAATATGAGGCATTTCAGATGGCGCTAACAAAAGTGATATATGACCCTAAAACAGTAGATGAATTTGAAAGAGATTGGGATGCCCTGACTCAACATCTTAGAACAAGAAATCATGAAAAGCTTCAAAGCTTGCATGAGGAACGAGAGCACTGGGCTCCAGTATACTCCAAGGACACAATTTTTGCTGGAATTTCTGATTATGAAAATGGCGAGTCTGTGGTTCCCTTTTTCAAAGGTCACGTACATCAGCAAACTTCGTTGAAAGAATTTTTTGAGATTTATGAAATAGTTCAACAAAAGAAGCAAAACAGTGAAGCTCTTGATGATTTGGAGTCACACAATTCAAGCCCGTTACTGAAAACAAGATGCTTCTACGAGCTACAACTCTCTAAATTGTACACAAATGCAATATTCAGGAAGTTCCAAGATGAGGTGGTGATGATGTCCTCCTGTTTCTGCGTCTCACAAATTCAAACAAATGAGTCAATTGTGACATACATGGTAAAAGAACATCAAGTGGAGGAATCTATAAGAGATGATAGGCATTTTGAAGTCATGTATGATAAAGCGGTAGCCGAAGTACGTTGCATATGTAGTTGCTTTAACTTCAAAGGCTACCTATGCAGGCATGCCTTGTATATCCTTAATTACAATGGCTTGGAAGAAATTCCATGTCAATATATTTTGTCAAGATGGAGGAAAGATTGTAAGCGATTGTATGTACCTCATCTCAGCTCAGATGATGTTGATATTACCAACCCAGTTCAGTGTTTTGATCATTTATACAAACGTGCTATGCAAGTAGTTGAAGAAGGCATGATATCTCAAAACCATTATATGGCTTCTTGGCAGGCATTTAAAGAGTCTTTGAATAAGATTCGATGTGTAGCTGACAGGATTGAATAA 2124 0.3879 MNDNIVCSPNDKGLLLTTNLDITIDEGSLHGEQLLEVEGKELENDCSQLFEIDGCEHENGRDENETAVVDSNSRESQGKDFQPPVVGMEFETYDDAYNYYNSYAKEIGFAIRVKSSWAKRNSKEKRGAVLCCNCEGFKTIKEANSHRKETRTGCLAMIRLRLVESNRWRVDEAKLEHNHSFDPERAQNSKSHKRMDSGAKRKFEPTLDVEVRTIKLYRMPNVDASGYGSSNSNEGGTSNNVKFSRRLKLKKGDAELISNYFCQRQLESPNFFYVMDLNDDGQLRNIFWIDSRSRSAYSYFGDVIAFDTTYLSNNYEIPLVAFVGINHHGQSILLGCGLLADETFDTYIWLFRAWITCMSGRPPQTIVTNQCKTLRSAIAEVFPRAHHRICLLQVMQSIRGCMVQFQEYEAFQMALTKVIYDPKTVDEFERDWDALTQHLRTRNHEKLQSLHEEREHWAPVYSKDTIFAGISDYENGESVVPFFKGHVHQQTSLKEFFEIYEIVQQKKQNSEALDDLESHNSSPLLKTRCFYELQLSKLYTNAIFRKFQDEVVMMSSCFCVSQIQTNESIVTYMVKEHQVEESIRDDRHFEVMYDKAVAEVRCICSCFNFKGYLCRHALYILNYNGLEEIPCQYILSRWRKDCKRLYVPHLSSDDVDITNPVQCFDHLYKRAMQVVEEGMISQNHYMASWQAFKESLNKIRCVADRIE 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi165g00003 707 ProSiteProfiles Zinc finger SWIM-type profile. 589 625 IPR007527 GO:0008270
Vivi165g00003 707 MobiDBLite consensus disorder prediction 58 82 - -
Vivi165g00003 707 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 70 700 IPR031052 GO:0006355
Vivi165g00003 707 Pfam FAR1 DNA-binding domain 98 182 IPR004330 -
Vivi165g00003 707 MobiDBLite consensus disorder prediction 179 199 - -
Vivi165g00003 707 Pfam MULE transposase domain 303 396 IPR018289 -
Vivi165g00003 707 SMART 26again6 600 627 IPR006564 GO:0008270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi165g00003 MULE 5.7e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi165g00003 K17604 - gmx:100796448 1199.88