Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi165g00002 ATGGAGAGGGAACATCTTGTTACAGTGGGCGACGACTCTCATTTTCTCGAAGAAGAAGACTTAAAGATGGACGATCCTTCTGTTTGTTGCGAACGATTACCGGATGGAGAATGCATTGAGATTCTGAAAGACGAAGATGATGTACTAATTGGATTAGATTGTCAAAATGATGTTTCTGAAGGAAGAAAAGAGTTTCTCGCACCCGCTGTCGGAATGGAATTTGACTCGTATGATGATGCTTACAATTATTACATTTGTTATGCCAAAGAGGTGGGATTTTGTGTGAGGGTGAAGAATTCATGGTTCAAGAGAAATAGCAAAGAAAAATACGGTGCAGTGCTTTGTTGTAGCAGCCAGGGTTTCAAGAGAATAAAAGATGTTAACAATTTGAGAAAAGATACGAGAACCGGTTGTACTGCTATGATAAGGATGAGGTTAGTGGAGTCTCGGAGATGGAGGATACGCGAGGTGACCCTTGAACATAACCACGTCTTAGGTGCGAAGATTCATAAATCGGTTAGAAAGATAGGAAGGGGAACTAAAAACAAGTTGTTACCTAGTTCGGATGATCGGGTGCAGACAATAAAGTTATATCGAGCACTTGTGATAGATGCGGGTGACGGTAATTCAAACTCCAATGCAAGAGACGATAAAGCTTTATGTGAATATTCTAATGAGTTGAACCTAAGAAAAGGTGACACGCAAGCCATTTATAATTTCATGTGCCGTATGCAACTGACTAATCCACACTTCTTTTATTTGATGGATTTCAATGAGGAAGGACATTTGAGGAATGTATTATGGGTTGATGCGAGATCTAGGGCTGCATGTGGCTATTTTAGCGATGTCATTTATTTTGACAACACTTATTTGACAAACAAATATGAAATCCCTCTTGTGGCTTTTGTTGGAATAAATCACCATGGTCAATCTGTGTTATTAGGTTGTGGTCTGCTTGCTGGGGAAACGACCGAATCATATGCTTGGTTATTTAGAACATGGGTTATGTGTATGTCAGGATGTTCTCCTCAAACTATTATTACAGATAGGTGCAAGGCTTTGCAGAGTGCAATTGCGGAAAATTTTCCCAAATCTCATCATTGTTTTGGCTTGTCGTTAATAATGAAAAAAGTACCAGAAAAGCTTGGAGGCTTGTGCAATTACGATGCAATTAGAAAAGCACTGGTTAGAGCCATTTATGAGACATTAAAAGTGATTGAATTTGAGGCCGCATGGGGCTTTATAATTCAACGTTTTGGGCTTACTGACCACGAGTGGCTTCGTTCCCTATATCAAGACCGAGTTCATTGGGCACCGGTATTTTTAAAGGATAAATTTTTTGGTGGAATGGCTGCGACACGCTCTGGTGAGAATCTTAGTCCATTTTTTGATAAATATGTGCACAAACAAACTCCTTTGAAAGAGTTTCTTGACAAGTATGAACTAGCTCTTCATAAAAAATACATGGAAGAATCTTTAGCAGATATTGAGTCACGAAGCTCAAGTCCCTTGCTGAAAACCAAGTGTTCTTTTGAACTGCAGCTCTCTAAAATGTACACAAGAGAAATATTCAGGAAATTTCAACTTGAAGTGGGAGAAATGCTCTCTTGTTTCGGGACGACTCAATTACACGTCGACGGTCCCATCATAATCTTCTTGGTCAAAGAGCGTGTTTTGGTTGAGGAAAACAAACGGAAGATTAAGGATTTCGAAGTTTTGTACAGTAGATCAGTAGGTGAAGTTCGTTGTATATGTTGTTGCTTTAATTTTTATGGATATCTATGTCGGCATGCATTGTGTGTACTCAATTTTAATGGGGTGGAAGAGATTCCTCCTAAGTACATTCTTTCAAGGTGGAAGAAAGATTACAAGCGCCTTTATGTTCCTGATCACAATTCCGATAGTTCTGATAGTATCGGCAGTATTCAATTGTGTAATAAGTTATTTAAAAGTGTCCTACAAGTTGTGGAGGAGGGAATGATTTCTGGAGACCATTACAATGTAGCATTGCAGGCTTTTGAAGAATCACTTAATAAGGTTCATGATGTAGAACAGAGGCATGAGTAA 2067 0.3899 MEREHLVTVGDDSHFLEEEDLKMDDPSVCCERLPDGECIEILKDEDDVLIGLDCQNDVSEGRKEFLAPAVGMEFDSYDDAYNYYICYAKEVGFCVRVKNSWFKRNSKEKYGAVLCCSSQGFKRIKDVNNLRKDTRTGCTAMIRMRLVESRRWRIREVTLEHNHVLGAKIHKSVRKIGRGTKNKLLPSSDDRVQTIKLYRALVIDAGDGNSNSNARDDKALCEYSNELNLRKGDTQAIYNFMCRMQLTNPHFFYLMDFNEEGHLRNVLWVDARSRAACGYFSDVIYFDNTYLTNKYEIPLVAFVGINHHGQSVLLGCGLLAGETTESYAWLFRTWVMCMSGCSPQTIITDRCKALQSAIAENFPKSHHCFGLSLIMKKVPEKLGGLCNYDAIRKALVRAIYETLKVIEFEAAWGFIIQRFGLTDHEWLRSLYQDRVHWAPVFLKDKFFGGMAATRSGENLSPFFDKYVHKQTPLKEFLDKYELALHKKYMEESLADIESRSSSPLLKTKCSFELQLSKMYTREIFRKFQLEVGEMLSCFGTTQLHVDGPIIIFLVKERVLVEENKRKIKDFEVLYSRSVGEVRCICCCFNFYGYLCRHALCVLNFNGVEEIPPKYILSRWKKDYKRLYVPDHNSDSSDSIGSIQLCNKLFKSVLQVVEEGMISGDHYNVALQAFEESLNKVHDVEQRHE 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi165g00002 688 Pfam SWIM zinc finger 578 602 IPR007527 GO:0008270
Vivi165g00002 688 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 55 682 IPR031052 GO:0006355
Vivi165g00002 688 ProSiteProfiles Zinc finger SWIM-type profile. 570 606 IPR007527 GO:0008270
Vivi165g00002 688 SMART 26again6 581 608 IPR006564 GO:0008270
Vivi165g00002 688 Pfam MULE transposase domain 283 377 IPR018289 -
Vivi165g00002 688 Pfam FAR1 DNA-binding domain 82 165 IPR004330 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi165g00002 MULE 3.1e-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi165g00002 - K17604 gmx:100796448 1123.61