Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1653g00003 ATGGCTTCGGTGATTAACGGAATGCCTAAAAGAAAGAAAGAGCAACATGATGATGATGATGCTGATGATGACAATGACTCATTGTCACATAATATTAAGAAACCTCGTCGTGTGGTTTGGTCTCATGATCTTCATAAAAAGTTTGTTGATGCTGTTAATGTACTTGGCATTTCAAATTCAAAGATTGTTCCGAGTAAAATAGTTGCTTTAATGAATGTGGATGGAATTAGTACCGCTCATGTCGCTAGCCATCTCCAGAGATACAGACTCCGTAACAAAGAGGCTGCACATGAAGCTGATAGAGATAGGGTTCCTTCAACAAAGATTCTTCAGCCTACTGATCAATCTCAAAACATCACCAACAGCTCCTTTAACAAAAAGCATGTCCATCAATCTCACACACAAATTTACTCTCCAACCGGTTTCAACATAAGTGGAGTCTCTCCTTCAACACTAATTCAATCTCAAAATATCAACATCCATCCACCACCATCCACTTTTCCTATAAATCATTACACCTCTAGTCTTCCAACTCCACTTGGATTTCCAACAACATCAGACTTCCATGATGTAGGGACATTTGTTGGATCATCTGCTTCTTCAACACCGATTCAACCTATTCCATCCACCTCGTCAATCATCCATCCACCACCGTACAAGTTTCCTATATATCATCAAAACCCTAGCTTTCCAACTCTTGTCAACCAATCTACAACTCCACTTGGATTTTCAACAACATCAGACTTCCATAATGTAGGGACATTGGTTGGATCATCTGCTTCTTCAACACTCATTCAACCTATTCAATCTCAACCTATCAACACCTCGCCAATCATCCATCCAATATATCATCCAAGCTCTAGTTTTCCAACTGACGTTAACCAATCTACAACTCCACTTGGATTTCCAACTACATTATTCGACTTCCATGATGTAGGCACATTTGATGGATCATCTGCTTCTTCAACACTCATTCAACCTATCAACACCTCCTCAATCATCCATCCACCACCATACAAGTCTCCAATATATCATCAAAGCCCTACTTTTCCAACTCTTGTTAACCAATCTACAACATCCCACTTCCATGACATTAGGGCTACTAACGTATGCCTTCCCCCATCTTTCTAA 1131 0.3988 MASVINGMPKRKKEQHDDDDADDDNDSLSHNIKKPRRVVWSHDLHKKFVDAVNVLGISNSKIVPSKIVALMNVDGISTAHVASHLQRYRLRNKEAAHEADRDRVPSTKILQPTDQSQNITNSSFNKKHVHQSHTQIYSPTGFNISGVSPSTLIQSQNINIHPPPSTFPINHYTSSLPTPLGFPTTSDFHDVGTFVGSSASSTPIQPIPSTSSIIHPPPYKFPIYHQNPSFPTLVNQSTTPLGFSTTSDFHNVGTLVGSSASSTLIQPIQSQPINTSPIIHPIYHPSSSFPTDVNQSTTPLGFPTTLFDFHDVGTFDGSSASSTLIQPINTSSIIHPPPYKSPIYHQSPTFPTLVNQSTTSHFHDIRATNVCLPPSF 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1653g00003 376 Gene3D - 32 94 - -
Vivi1653g00003 376 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 18 272 IPR044841 GO:0003700|GO:0006355
Vivi1653g00003 376 NCBIfam myb-like DNA-binding domain, SHAQKYF class 36 91 IPR006447 GO:0003677
Vivi1653g00003 376 SUPERFAMILY Homeodomain-like 34 94 IPR009057 -
Vivi1653g00003 376 MobiDBLite consensus disorder prediction 1 30 - -
Vivi1653g00003 376 FunFam Two-component response regulator 31 96 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1653g00003 11 90 Response Regulator Gene Family AT3G16857 51.250 6.55e-19 86.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Vivi1653g00003 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1653g00003 - K14491 vvo:131604558 454.136