Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi164g00019 ATGGATGATTCAATCAAAGTGATCTCCACAAGTACAATCCAAGCACCAAATGGCAACTCAACCGATTTTCAAAAACTAGACTTAACACCATGGGATCTCCAATTCCTCCCCATTGAAACCAACCAAAAAGGCCTTATTTTCCACCACCAACCCAATATTGACCCATCTTTGTTAAAAAACCAAATCCATCATTTGAAACAAACTCTCTCCTCCACTCTTTCTTTCTTCCCACCCCTCGCCGGTCGTCTTGTAATCACTCAACACCAATCAGAAGAAGAAAACAACAACCCCTCATCATCATCATCATGTCACATCATTTGCAACAACGTTGGCGCGCTGTTCGTCCACGCCACAGCACAAAACGTTACTGTTTCTGACATCCTTCAACCCGAAAACTATATTGTACCTCCCATTGTCTACTCTTTCTTCCCTCTCAACGGCGTTAAAAACTGTGAATCCACTTCCCATCCGATTCTTGCTGTCCAAGTAACCGATTTACTTGACGGCTTATTCATTGGCATTACAATCAACCACGCAGTAATAGACGGTAAGTCATTTTGGCATTTTGTCAATTCTTGGTCTCAAATCTCACGAGGTGATTCTTTAAACAAACTCCCTTCACTTAAACGTTGGTTTCCAAACGACATTCATCAACTTCCCATACGTTTCCCTTTCACAACTGATCAATTAACCGAAACCTCCAATCCCAACAACTTAGCTGAAAGAGTTTTCCATTTCACAAAGGAGAAAATCTCCGAACTGAAATCAAAAGCGAACGTCGAAACTGAAACTGAGAATATTACAATCTCTTCGCTTCAAGCGGTACTATCTCATGTTCTGCGTTCCGTTGTTCGTTGCGAAAGACTTGATCCACAACAAGAGGTTCTATTTTTTTTGCTGATTGGGGTTAGAGCAAAGATGATTCCTCCGCTTGAAGATGAATATTTCGGAAACGCAATTTTGGTATGTGCGTTTACAATGAAAGCAGAAGAAATTCTTGACAGTGGTATTGGAAAGGTTGCTTTGAAGATGAACAAATCGATTTCTCTATATTCCGATAATGAGAAAATAAAAAACAGTTATGAGCGTTGGTTGAAAAAACCAAAGTTTCTTACGGGTGGTGAGGTGGCCCGTAGGTATTATTACTTGACAACAACAAATTCTCCGAGGTTTGATGTTTATGGTAATGATTTTGGTTGGGGAAAGCCGGTCGGTGTTCGAAATGGCGGTGCGAATAAAGATAATGGAAAGATTAGTGTGTTTGCTGGGGCTGATGAGGGAAGTATGGACATTATAGTATGCCTTCCTTGTAAGGTTTTGGAGGACATGGGAAATGACACTGAGTTCTTGAGTTACTAG 1359 0.4077 MDDSIKVISTSTIQAPNGNSTDFQKLDLTPWDLQFLPIETNQKGLIFHHQPNIDPSLLKNQIHHLKQTLSSTLSFFPPLAGRLVITQHQSEEENNNPSSSSSCHIICNNVGALFVHATAQNVTVSDILQPENYIVPPIVYSFFPLNGVKNCESTSHPILAVQVTDLLDGLFIGITINHAVIDGKSFWHFVNSWSQISRGDSLNKLPSLKRWFPNDIHQLPIRFPFTTDQLTETSNPNNLAERVFHFTKEKISELKSKANVETETENITISSLQAVLSHVLRSVVRCERLDPQQEVLFFLLIGVRAKMIPPLEDEYFGNAILVCAFTMKAEEILDSGIGKVALKMNKSISLYSDNEKIKNSYERWLKKPKFLTGGEVARRYYYLTTTNSPRFDVYGNDFGWGKPVGVRNGGANKDNGKISVFAGADEGSMDIIVCLPCKVLEDMGNDTEFLSY 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi164g00019 452 Pfam Transferase family 5 449 - -
Vivi164g00019 452 Gene3D - 3 218 IPR023213 -
Vivi164g00019 452 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 7 450 - -
Vivi164g00019 452 Gene3D - 225 444 IPR023213 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi164g00019 46 435 Monolignol Biosynthesis Gene Families AT5G48930 24.155 2.45e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi164g00019 - - gmx:100500257 485.723