Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi164g00015 ATGGATGATTCTGTGAGAGTAATCTCCACAAGTACAATTCAAGCACCAAGTGACAATAACATTAATACAAACTCAACTGACTTTCACAAAATCCATTTAACACCATGGGATCTCCAATTCCTCCCACTTGAACCCATTCAAAAAGGCCTTCTTTTCCACCACACCATTGATCCATCCAAATCCCAAATCCAGCATTTGAAACAAACCCTCTCCACCACTCTTTCCTTCTTTCCACCCCTCGCCGGTCGTCTTGTAATCACTCAACACAAAGAAGAACACAACACCACCACCTCATCGTCATGTTACATCGTCTGCAACAACGCTGGCGCGCTCTTCGTCCACGCCACAGCACAAAACACCACTGTTTCTGATATCCTTCAACCAGAAAACTATATTGTACCTCCCATTGTCTACTCTTTTTTCTCTTTCAACGGCGTCAAAAACTACGAATACACTTCCCACCCAATTCTTGCTGTCCAAGTAACCGAGTTACAGGACGGTATCTTCATAGGTTTCACACTCAACCACCTTGCATCAGATGGAAAGTCCTTCTGGCATTTCATCCATTCTTGGTCTCAAATCTCACGAGGAGTTTCCTTAAACAAACTCCCTTTACTTAAACGCTGGTTTCCGAACGACATTCATCAACTTCCCATACGTTTCCCTTTCACAACTGATCAATTCACCCAAACCTCCAAACCAAACAACTTAGGTGAAAGAGTTTTCCATTTCACGAAGGAGAAAATCGCGGAACTGAAATCAAAAGCAAACACAGAAACTGAATCTGAAAATATTACAATCTCTTCACTTCAAGCGGTATTATCTCACGTTTTGCGTTCCGTGGTTCGTTGCGAAAGACTTGATCCACATGAAGATGTTTGTTACGGTTTGCTGATTGGAGTTAGAGCAAAGATGATTCCTCCGCTCGAAGATGAATATTTCGGAAACGCAATTGCGGTGTGTGGTTTTACAATGAAAGCAGGAGAAATTCTTGGTAGTGGGATTGGAAAGGTAGCAGTAGAGATGAACAAGACTATTTCTGTAAATTCTGATGATGAGAAAATAAAAAACAGTTATGATTCTTGGTTGAGAAAACCAAAGTTGTTTACAGGTGGGAGTGATTTGAGTGGTTGTTATTCGTTGACAACGAACAGTTCTCCGAGGTTTGATGTTTATGGTAATGATTTCGGGTGGGGAAAGCCGGTGGCAGTTCGATGCGGGGGTGCGAATAAAAGAAATGGGAAGATTAGTGTGTTTGCTGGGGCGGAAGAAGGCAGTATAGATGTTTTACCATGTCTTTCTTATGAGATATTGGTGGCCATGGGAAATGATACTGAGTTCTTGCATTAA 1350 0.4193 MDDSVRVISTSTIQAPSDNNINTNSTDFHKIHLTPWDLQFLPLEPIQKGLLFHHTIDPSKSQIQHLKQTLSTTLSFFPPLAGRLVITQHKEEHNTTTSSSCYIVCNNAGALFVHATAQNTTVSDILQPENYIVPPIVYSFFSFNGVKNYEYTSHPILAVQVTELQDGIFIGFTLNHLASDGKSFWHFIHSWSQISRGVSLNKLPLLKRWFPNDIHQLPIRFPFTTDQFTQTSKPNNLGERVFHFTKEKIAELKSKANTETESENITISSLQAVLSHVLRSVVRCERLDPHEDVCYGLLIGVRAKMIPPLEDEYFGNAIAVCGFTMKAGEILGSGIGKVAVEMNKTISVNSDDEKIKNSYDSWLRKPKLFTGGSDLSGCYSLTTNSSPRFDVYGNDFGWGKPVAVRCGGANKRNGKISVFAGAEEGSIDVLPCLSYEILVAMGNDTEFLH 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi164g00015 449 Gene3D - 3 217 IPR023213 -
Vivi164g00015 449 Pfam Transferase family 27 447 - -
Vivi164g00015 449 Gene3D - 223 441 IPR023213 -
Vivi164g00015 449 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 8 448 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi164g00015 64 436 Monolignol Biosynthesis Gene Families AT5G48930 25.945 1.06e-28 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi164g00015 - - gmx:100500257 481.485