Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi164g00013 ATGGATGATTCTGTGAAAGTAATCTCCACAAGTACAGTTCAAGCACCAAGTGACAACAACATTAATGCAAACTCAACTGACTTTCACAAAATCCATTTAACACCATGGGATCTCCAATTCATCCCACTTGAAACCATTCAAAAAGGCCTTCTTTTCCACCACCATACCAATATTAATCCATCATCTTTAAAAAACCAAATCCATCATTTGAAACAAACTCTTTCCACCACTCTTTCCTTCTTTCCACCCCTCTCCGGTCGTCTTGTAATCACTCAACACCAACAACAAGAAGAAAACAACAACCCCTCATCATCTTGTTACATCATCTGCAACAACCTTGGCGCGCTCTTCGTCCATGCCAAAGCAGAAAAGACTACCGTTTCTGACATCCTTCAACCCGAAAACTACATTGTACCTCCCATTGTATACTCTTTCTTCCCTCTCAACGGCGTCAAAAACTGGGAATCCACTTCCCATCCAATTCTTGCCGTTCAAGTAACCGAGTTACTGGACGGTATCTTCATAGGTTTCACAATGAACCACCTCGCTGCGGACGGAAAATCCTTTTGGCACTTCATCAATTCATGGTCTCAAATCTCACGAGGAGTTTCTTTAAACAAACTCCCTTCACTTAAACGCTGGTTTCCAAACGACATTCATCAACTTCCCATACGTTTCCCTTTCACAACTGAATTCATTCATAGCTCCAGGTCCACCAACGTAGCTGAAAGAGTATTCCATTTTACAAAGGAGAAGATCGCCGAACTGAAATCCAAAGCAAACACAGAAATAAAAACTGAGAATATTACAGTCTCTTCACTTCAAGCAGTACTATCTCACGTTTTGCGATCGGTGGTTCGTTGCGAAAGACTTGATCCACAACAAGACGTCCTTTACATATTGGTGATCGGCGTTAGGCCAAGGATGAATCCACCGCTCGAAGATGAGTATTTCGGGAACGCAGCGTTTCTTTGTGGTTTTACAATGAAAGCATGGGAGATTCTAGAGTGTGGGATTGGAAAGGTAGCATTGGAGATGAATAAGACGATTTCTGTGAATTCTGATTATGAGAAAATAAGAAACAGTTACGAGTGTTGGTTGAGAAACCCGAAGTTGCTTACGGGTGGTGACTTGACTCGTTGTTATTCGATGACAACGAGCAGTTCTCCGAGGTTTGATGTTTATGGTAATGATTTCGGTTGGGGAAAGCCTGTGGCAGTTCGTTGCGGGGGCGCGAATAAAAGAAATGGCAAGATTACTGTGTTTGCTGGGGCAGAAGAGGGAAGTATGGACATTTCACTGACTCTTCCTTATGAGATCTTGGAGGCCATGGGAAATGACACTGAGTTCATGCATTAA 1359 0.426 MDDSVKVISTSTVQAPSDNNINANSTDFHKIHLTPWDLQFIPLETIQKGLLFHHHTNINPSSLKNQIHHLKQTLSTTLSFFPPLSGRLVITQHQQQEENNNPSSSCYIICNNLGALFVHAKAEKTTVSDILQPENYIVPPIVYSFFPLNGVKNWESTSHPILAVQVTELLDGIFIGFTMNHLAADGKSFWHFINSWSQISRGVSLNKLPSLKRWFPNDIHQLPIRFPFTTEFIHSSRSTNVAERVFHFTKEKIAELKSKANTEIKTENITVSSLQAVLSHVLRSVVRCERLDPQQDVLYILVIGVRPRMNPPLEDEYFGNAAFLCGFTMKAWEILECGIGKVALEMNKTISVNSDYEKIRNSYECWLRNPKLLTGGDLTRCYSMTTSSSPRFDVYGNDFGWGKPVAVRCGGANKRNGKITVFAGAEEGSMDISLTLPYEILEAMGNDTEFMH 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi164g00013 452 Gene3D - 231 446 IPR023213 -
Vivi164g00013 452 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 8 451 - -
Vivi164g00013 452 Gene3D - 4 227 IPR023213 -
Vivi164g00013 452 Pfam Transferase family 24 451 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi164g00013 70 439 Monolignol Biosynthesis Gene Families AT5G48930 27.595 1.86e-28 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi164g00013 - - gmx:100500257 495.352