Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi164g00011 ATGAATGATACTGTGAAAGTAATCTCCACAAGTACAGTTCAAGCACCAATTAATAACAACACTAATGCAAACCCAACTGACTTTCAGAAAATTCATTTAACACCATGGGATCTCCAATTCATCCCACTTGAAACCATTCAAAAAGGCCTTCTTTTCCACCACCAAACCAATATTGACCCATCATCATTAAAAAACCAAATCCATCATTTGAATCAAACCCTTTCCACCACTCTTTCCTTCTTTCCACCCCTCGCCGGTCGTCTTGTAATCACTCAACACCAACAACAAGAAGAAAACAACAACCCCTCATCTTCATGTTACATCATCTGCAACAACCTTGGCGCGCTCTTCGTCCACGCCACAGCACAAAACACGACCGTTTCTGATATCCTTCAACCAGAAAACTATATTGTACCTCCCATTGTCTACTCTTTCTTCCCTCTCAACTGCGTCAAAAACTGGGAATCCACTTCCCATCCAATTCTTGCTGTCCAAGTAACCGAGTTATTGGACGGTATCTTCATAGGTTTCACAATGAACCACCTTGCAGCGGACGGAAAATCCTTTTGGCACTTCATCAATTCATGGTCTCAAATCTCACGAGGAGTTTCGTTAAACAAACATCCTTCACTCAAACGCTGGTTTCCGAACGATATTCTTCAACTTCCCATACGTTTCCCTTTCACAACTGAATTCATTCATAGCTCCAGGTCCACCAACGTAGCTGAAAGAGTATTCCATTTCACAAAGGAGAAGATCGCAGAACTGAAATCAAAAGCGAACACCGAAACTGAAACTGAGAATATTACAATCTCTTCACTTCAGGCGGTATTATCTCACGTTTTGCGTTCTGTGGTTCGTTGCGAAAGACTTGATCCACAACAAGAGGTTCTTTACATATTGGTGATCGGCGTTAGGCCAAGGATGATTCCACCGCTCGAAGATGAATATTTCGGGAACACAGCGTTTCTTTGTGGTTTTACAATGAAAGCATGGGAGATTATAGAGTGTGGGATTGGAAAGGTAGCATTGGAGATGAATAAGACGATTTCTGTGAATTCTGATTATGAGAAAATAAGAAACAGTTACGAGTGTTGGTTGAGAAACCCGAAGTTGCTTACGGATGGTGACTTGACTCGTTGTTATTCGATGACAACGAGCAGTTCTCCGAGGTTTGATGTTTACGGTAATGATTTCGGTTGGGGCAAGCCTGTGGCAGTTCGATGCGGGGGTGCGAATAAAAGAAATGGCAAGATAACTGTGTTTGCTGGAGCAGAAGAGGGAAGTATGGATATTTCACTGACTCTTCCTTATGAGATCTTGGAAGCCATGGGAAATGACACTCAGTTCATGCATTAG 1359 0.4231 MNDTVKVISTSTVQAPINNNTNANPTDFQKIHLTPWDLQFIPLETIQKGLLFHHQTNIDPSSLKNQIHHLNQTLSTTLSFFPPLAGRLVITQHQQQEENNNPSSSCYIICNNLGALFVHATAQNTTVSDILQPENYIVPPIVYSFFPLNCVKNWESTSHPILAVQVTELLDGIFIGFTMNHLAADGKSFWHFINSWSQISRGVSLNKHPSLKRWFPNDILQLPIRFPFTTEFIHSSRSTNVAERVFHFTKEKIAELKSKANTETETENITISSLQAVLSHVLRSVVRCERLDPQQEVLYILVIGVRPRMIPPLEDEYFGNTAFLCGFTMKAWEIIECGIGKVALEMNKTISVNSDYEKIRNSYECWLRNPKLLTDGDLTRCYSMTTSSSPRFDVYGNDFGWGKPVAVRCGGANKRNGKITVFAGAEEGSMDISLTLPYEILEAMGNDTQFMH 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi164g00011 452 Gene3D - 232 446 IPR023213 -
Vivi164g00011 452 Pfam Transferase family 23 450 - -
Vivi164g00011 452 Gene3D - 2 221 IPR023213 -
Vivi164g00011 452 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 8 451 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi164g00011 70 439 Monolignol Biosynthesis Gene Families AT5G48930 28.070 2.01e-27 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi164g00011 - - gmx:100500257 477.633