Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi161g00013 ATGGGTTATCACAGTGAGAAAGAATGGTACTTTTTCTCTCAGGGGGATCGAAAATACTCGAACAGTTCCCGGCCTAACCGGGTTGCCGGAAGTGGTTACTGGAAGGCTACCGGAGCTGATAAACCAACTGGGAAAGTGAAACCAATGGGGATACAAAAAGCACTGGTTTTCTATGCCGGTAAAGCCCCCAAAGGAGTGAAAACTAATTGGATTATGCATGAATATCGTCTTGCCAACGTTGATAGGCCCGCCAGTAAGAAAAATAATTTAAGGCTTGATGATTAGGTATTATGTAGAATTTACAACAAGAAAGGAAAGATTGAGAAATTCAACACGAGTCTGGGAACTCTTGTCCATCAAGAAAATGCTGAACTCCATAAAAAAATGGACTTCATTCAGAAAGAAAATGCAGAGCTACAGAAGAAGGTTTATGAAGCAAGGAGTACAAATGAAGAAAATGTGGCATCGAATCTTTCATGCACTATCAATAGATATGATTTACATGCGCCGATCAGTCTTCAGCTAAGGCAACCACGGACTCAATACAGTGAACCCGCAACCATGAAATTATGGTATTCCCTCGAACTAATAATATATCGCATATAG 606 0.4059 MGYHSEKEWYFFSQGDRKYSNSSRPNRVAGSGYWKATGADKPTGKVKPMGIQKALVFYAGKAPKGVKTNWIMHEYRLANVDRPASKKNNLRLDDXVLCRIYNKKGKIEKFNTSLGTLVHQENAELHKKMDFIQKENAELQKKVYEARSTNEENVASNLSCTINRYDLHAPISLQLRQPRTQYSEPATMKLWYSLELIIYRI 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi161g00013 201 SUPERFAMILY NAC domain 4 103 IPR036093 GO:0003677|GO:0006355
Vivi161g00013 201 Pfam No apical meristem (NAM) protein 5 77 IPR003441 GO:0003677|GO:0006355
Vivi161g00013 201 Gene3D NAC domain 2 108 IPR036093 GO:0003677|GO:0006355
Vivi161g00013 201 ProSiteProfiles NAC domain profile. 1 103 IPR003441 GO:0003677|GO:0006355
Vivi161g00013 201 Coils Coil 122 149 - -
Vivi161g00013 201 PANTHER NAC TRANSCRIPTION FACTOR 56 5 140 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi161g00013 1 110 NAC Transcription Factor Family AT5G08790 79.464 4.77e-60 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vivi161g00013 NAM 2.3e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi161g00013 - - vvo:131654095 346.665