Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi161g00008 ATGCAAACAAGAGAAGCAACAACAACCGGACTCAATTACATGATCCCATCAAACACATCACCATATCTACAAACCTACAACAACATTAATCCAACATTCCATCTCCAAAAACTCTCAAACCAATTATTCAATTACCAAAACACCCCTCAATTTCACCATGACTTCAATTATAGTCCTCAATCCTCATGCATAAGTAACAACTCAACTTCTGATGAAGCTGATGAGCAAAACCTAAGCCTCATCAACGAGAGGAAACATCGAAGGATGATATCGAACCGCGAATCGGCTCGTCGATCGCGTATGAGGAAACAGAAACACCTTGATGAACTTTGGTCACAAGTGCTTTGGCTGAGGAATGAAAATCATCAACTTATAGAGAAACTTAACCATGTTTCGGAGAATCATGATCAAGTTGTTCAAGAGAATTCTCAGCTGAAAGAAGAAGCTTTGGAACTTAGACAAATGATAAGAGACATGCAAATTCATAGTCCTTTGATTCCTTCTTTTAGTCCCTTGGAAGATACTTATCTTAGAGATGATTCTTCAAACAATTCCATCTAA 561 0.3797 MQTREATTTGLNYMIPSNTSPYLQTYNNINPTFHLQKLSNQLFNYQNTPQFHHDFNYSPQSSCISNNSTSDEADEQNLSLINERKHRRMISNRESARRSRMRKQKHLDELWSQVLWLRNENHQLIEKLNHVSENHDQVVQENSQLKEEALELRQMIRDMQIHSPLIPSFSPLEDTYLRDDSSNNSI 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi161g00008 186 Coils Coil 128 162 - -
Vivi161g00008 186 SMART brlzneu 80 144 IPR004827 GO:0003700|GO:0006355
Vivi161g00008 186 Pfam bZIP transcription factor 84 136 IPR004827 GO:0003700|GO:0006355
Vivi161g00008 186 SUPERFAMILY Leucine zipper domain 84 137 IPR046347 GO:0003700|GO:0006355
Vivi161g00008 186 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 15 165 IPR044521 -
Vivi161g00008 186 CDD bZIP_plant_GBF1 85 136 IPR045314 GO:0003700|GO:0006355
Vivi161g00008 186 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 87 102 IPR004827 GO:0003700|GO:0006355
Vivi161g00008 186 Gene3D - 82 137 - -
Vivi161g00008 186 FunFam BZIP transcription factor 82 133 - -
Vivi161g00008 186 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 82 145 IPR004827 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi161g00008 59 165 bZIP Transcription Factor Family AT3G30530 74.545 2.09e-50 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi161g00008 bZIP_1 2.7e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi161g00008 - - gmx:100791105 259.996