Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1605g00001 ATGTCAAGGCCTGTTGAGAGAATAGCAGAGATCAATGATGGAAAAGAGCTTTGGAAGATTGTTGTTAGGATTCACCACCGATGGAAAGTTGTCTCCAACAGCAAGGAACATTTTGAAATGATCTTTGTTGACAAATTGGGAGATGATATTCATGCTGTTGTTCCAGCACCGCATGTGTCGGTTTTCACCGAAAAATGCTTATTAGGCCATACTTATACTGTATCTAATTTTAAGGTGGTGCCTTATGTTCTGGCCTTCAGGGCATCGGGACACAGATATATGATAAAGTTTACTGCTGGAACGTCTGTTCTTGATGAAGACAAACATGAGATACCCGCGAAATCGATTTTATTTACAAGTTTTTCAGACATCATAACAGGGAGGTTTGACAAACATGTTCTGATTCATGTCATTGGAATGGTGGATAGTATTGGTTATGCGCAGACTGAGTCAGGTGCAAAGAAGCAGCAAATTAGCATGATGTTGCGTGATCACAGCAACAACATGTTGAACTGTACTCTGTGGGAATCATACGCGGATCAGTTCATCAAGTTTAACAAAGTTAGGGTTGCTGCATCACTACCTACAGTTGTGTTGCTTCAGTATGCCAAAGTGAAGGAAGAAGGAAAGTATCCTCTGTCTGTGACAAACACCTACAATGTGAGCCTTTTATGTGTTGATGCTGATTTTCCGATCATGAAAGACTTTATTAATAGGTATGTTGATAGTGTCATCCATTTTATGCAATTATTTTTTCATGTATGA 765 0.3935 MSRPVERIAEINDGKELWKIVVRIHHRWKVVSNSKEHFEMIFVDKLGDDIHAVVPAPHVSVFTEKCLLGHTYTVSNFKVVPYVLAFRASGHRYMIKFTAGTSVLDEDKHEIPAKSILFTSFSDIITGRFDKHVLIHVIGMVDSIGYAQTESGAKKQQISMMLRDHSNNMLNCTLWESYADQFIKFNKVRVAASLPTVVLLQYAKVKEEGKYPLSVTNTYNVSLLCVDADFPIMKDFINRYVDSVIHFMQLFFHV 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1605g00001 254 CDD RPA1_DBD_B_like 137 240 - -
Vivi1605g00001 254 SUPERFAMILY Nucleic acid-binding proteins 118 240 IPR012340 -
Vivi1605g00001 254 Gene3D - 3 105 IPR012340 -
Vivi1605g00001 254 Gene3D - 110 245 IPR012340 -
Vivi1605g00001 254 SUPERFAMILY Nucleic acid-binding proteins 7 103 IPR012340 -
Vivi1605g00001 254 Pfam Domain of unknown function DUF223 39 134 IPR003871 -
Vivi1605g00001 254 CDD RPA1_DBD_A_like 19 103 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1605g00001 5 240 Core DNA Replication Machinery Family AT5G45400 21.545 3.00e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1605g00001 - - vvo:131642352 514.998