Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1601g00002 ATGCTGTTTGTCAATTTGATGTTGAAGGTATATAGAATTAATTGTGTATATGTTCATCAGGCACTTGTTGATGCTCCTGATATGGAGAGGTCCCCTATAAATTTCAAGAGGCTTTCGCTTACTGACCTCAAGATTGATATTAAGTGGGTTCCCAAGAAGAAGGATCTCGTCAAAGCTTTGGAGGCTGCTGATGTTCAGAATAAGTGGGCAAAGAGCTCATGGGGTAGAAAACTGATTGTGAAGAACACTAGAGCAACACTCAATGATTTTGATAGGTTCAAGATAATGTTGGCAAAGATCAAGAGGGCTGCTGGTGTTAGGCAAGAGCTTTCTAAGTTGAAGAAGACTGCAGCTTAG 357 0.4062 MLFVNLMLKVYRINCVYVHQALVDAPDMERSPINFKRLSLTDLKIDIKWVPKKKDLVKALEAADVQNKWAKSSWGRKLIVKNTRATLNDFDRFKIMLAKIKRAAGVRQELSKLKKTAA 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1601g00002 118 Gene3D - 10 71 IPR014722 -
Vivi1601g00002 118 Pfam Ribosomal protein L14 30 102 IPR002784 GO:0003735|GO:0005840|GO:0006412
Vivi1601g00002 118 Gene3D - 77 112 - -
Vivi1601g00002 118 PANTHER 60S RIBOSOMAL PROTEIN L14 13 116 IPR039660 GO:0003723|GO:0003735
Vivi1601g00002 118 SUPERFAMILY Translation proteins SH3-like domain 20 78 IPR008991 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1601g00002 13 115 Cytoplasmic Ribosomal Protein Gene Family AT4G27090 71.845 4.78e-47 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1601g00002 K02875 - gmx:100499889 160.999