Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1590g00001 ATGGCAAAATCTATACCAAAAATTGGTTCACGTAAAACTGGACGTATTTGTTCGCGTAAGCATCCTCGTAAAATAGGAAAGGGGTTCTTTTATATTCAAGCTAGTTTCAACAATACCATTGTGACTGTTATAGATGTACGAGGTCAGGTGATTTCTTGGTCCTCCGCCGGTTCATGTGGATTTAAGGGTACACGAAGGGGCACACAGTTTGCCGCTGAAACCGCAGCGGGAAATGCTATTCAAATAGTAGTCGATCAAGGCACGCAACGAGCAGAAGTCCGGATAAAAGGTCCCGGTCTAGGAAGAGATGCGGCATTAAGAGCTATTCTAGTAGCTAGTCGTAAAAGTGGGATACTATTAAGGGTTATACGGGATGTAACCCCTCTTCCACATAATGGGTGCAGGGCTCTTTAA 414 0.442 MAKSIPKIGSRKTGRICSRKHPRKIGKGFFYIQASFNNTIVTVIDVRGQVISWSSAGSCGFKGTRRGTQFAAETAAGNAIQIVVDQGTQRAEVRIKGPGLGRDAALRAILVASRKSGILLRVIRDVTPLPHNGCRAL 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1590g00001 137 PIRSF RPS11p_RPS11a_RPS14e_RPS11o 6 137 IPR001971 GO:0003735|GO:0005840|GO:0006412
Vivi1590g00001 137 Hamap 30S ribosomal protein S11 [rpsK]. 11 137 IPR001971 GO:0003735|GO:0005840|GO:0006412
Vivi1590g00001 137 SUPERFAMILY Translational machinery components 24 135 - -
Vivi1590g00001 137 PANTHER 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 27 135 IPR001971 GO:0003735|GO:0005840|GO:0006412
Vivi1590g00001 137 Gene3D Ribosomal protein S11 12 137 IPR036967 GO:0003735|GO:0005840|GO:0006412
Vivi1590g00001 137 Pfam Ribosomal protein S11 28 136 IPR001971 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1590g00001 28 132 Cytoplasmic Ribosomal Protein Gene Family AT3G11510 31.579 2.17e-07 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1590g00001 K02948 - pop:4929706 207.223